| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0649 |
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| Symbol | torT |
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| ID | 5134374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 716421 |
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| End bp | 717413 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530971 |
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| Product | TMAO reductase system periplasmic protein TorT |
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| Protein accession | YP_001215488 |
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| Protein GI | 147672222 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAATC TGCGTTTGCA CTCATTTTCA CTGATTTCTG CACTTTTGCT GCTCTCTGCA
CTGCCAGCGG CTGGCGCGGA AAAACTCTGT GCGCTTTACC CTCATCTTAA AGATTCTTAC
TGGCTGTCGG TCAACTACGG CATGGTGGAG GAAGCACGCA AGCTCAACCT CAACTTGCGC
GTTATGGAGG CGGGTGGCTA CCCGAATCAC CACAAACAGC AGCAACAAAT TGCCCTGTGC
GTACGTTGGG GAGCTGACGC CATTTTGCTT GGCACCGTAT CACCCGAGCT GTACCAAGAT
GATTTAGCCC ACTACACCCG CTCCGTTCCT GTGTTTGCGA CGGTGAATCA GTTGCGGTTG
AATGAGCAAC AGCAAGAGCA TCTAAAAGGC GAAGTGGGCG TTGATTGGTA TTGGATGGGA
TTTTACGCAG GGGAATATTT AGCGCGTAAA CACCCTAAAG GTAGCGGCGA AATTAAGATT
GTGGTGCTAC CCGGCCCCGC TTCGAGTGGC GGAACAAAGC CCGTTTTACA AGGGCTGGAA
GAGGCGATTC GTCACAGTGA TGTGCGTATT ACAGAAATCT TGTGGGCAGA CAACGATAAA
GAGCTGCAAC GCAATTTGAT ACAGCAAGCC TTAGAGCAAC CGGACGTGCG TTATTTGGTT
GGCAGTGCGG TGGCGATTGA AGCGGCGATC AGCGAATTGC GTTCACTCAA CAAAAGTGAC
CAAATCGGCC TTATCGCAAC CTATTTGAGT CATGGCGTTT ATCGCGGATT ACTGCGTGGG
CGCGTAGAGT TTGCCCCAAC CGATCAAATG GTCGAACAAG GTCGGCTTTC CGTACGCCAA
GCCGCTGCTT TTTTACGCAA CAAACCGTAC GCGACACAAC AAGCACCTAA GATTGAAGCG
TTAACCCCCA AGCACCTAGA GAAAAAGATC ATTGCAGATT CGTTATCTCC GTCCGAATAC
AGGCCAGTAT TTCAAGTAAA AGCGGTTGAA TAA
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| Protein sequence | MPNLRLHSFS LISALLLLSA LPAAGAEKLC ALYPHLKDSY WLSVNYGMVE EARKLNLNLR
VMEAGGYPNH HKQQQQIALC VRWGADAILL GTVSPELYQD DLAHYTRSVP VFATVNQLRL
NEQQQEHLKG EVGVDWYWMG FYAGEYLARK HPKGSGEIKI VVLPGPASSG GTKPVLQGLE
EAIRHSDVRI TEILWADNDK ELQRNLIQQA LEQPDVRYLV GSAVAIEAAI SELRSLNKSD
QIGLIATYLS HGVYRGLLRG RVEFAPTDQM VEQGRLSVRQ AAAFLRNKPY ATQQAPKIEA
LTPKHLEKKI IADSLSPSEY RPVFQVKAVE
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