| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0638 |
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| Symbol | |
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| ID | 5134182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 699339 |
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| End bp | 702494 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530960 |
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| Product | chitodextrinase |
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| Protein accession | YP_001215477 |
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| Protein GI | 147672168 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTAC TCGAAGGAAA AGCAGGGAAG AGTGTTTTTA CACTAAGCAC TTTAACCGCT
TCATGTTTAA TGGCTTTTAG CAGCTATGCT GCGGTGGATT GCTCGACGTT ACCTGAATGG
CAATCGTCTG CGGTGTATAC CGGTGGTGCC AAAGTGCAGC ACAAGGGCAA TGCTTACCAA
GCCAACTACT GGACTCAAAA CAACGATCCT GAAACCTTTT CTGGTAACTA TGCCCAATGG
AAACTGTTGG ATTCATGCAG CACATCGGGG GGGACTAACC AAGCACCGAG TGTGACGTTA
ACCGCACCGC TTGCCACTGC GCAGGTGAAA GCCGGAGAGG TCATGACACT CGCAGCAAAC
GCCTCTGATG CAGATGGTTC TGTCGCGCGT GTTGAGTTCT CAGTGGATGG CGTATTGGTT
GGTCAGGCAA CCAAAGCCCC GTACAGCGCG AGCTGGACAG CGACCAAAGG AACGCATGAA
TTTAGTGCGG TTGCCTTTGA TGATAAAGGG GCTGTCAGCA CCAAAAATGC AGTCACTCTG
ACGGTGAGTG ACGCTGGTCC AGCGAATCAA GCGCCAACCG TGGCGGTGGC TCTCTCTGCA
TCAAGCGTGG ATGTTGGGAC GGTCGTAACG TTGAGCGCAG AAGCGGCGGA TGCAGATGGC
TCAGTAGAGA AAGTCGATTT CTATGTTGGT GGTGCGCTTG TCGGCACTTC AGCAAAAGCA
CCTTACACTC TCAATTACAC GGCAACCAAA GCAGGTTCAC TAGCGGTTTA CGCGCGTGCT
ACCGACAACT TAGGGGCAGC CACAGATTCT GCACTGACCA CGCTGGTGGT GAATGGCGTC
GCACCGGTTG CGAATTGCCG TCCGGATGGT TTGTATCAAA CGGAAGGCGT ACAAGTGCCA
TACTGTACCG TTTACGATGC AGATGGCCGT GAGAAAATGG GCGTGGATCA TCCACGCCGT
GTGATTGGTT ACTTTACCAG CTGGCGTTCA GGCGATGATC CGCAAGCCGC TTACTTGGTT
AAAGACATTC CTTGGGAGCA ACTGACACAC ATTAACTATG CGTTTGTCAG CATTGGTTCG
GATGGCAAAG TGAATGTCGG TGATGTCAAC GATCCAAATA ACGCGGCCGT TGGTAAAGAG
TGGCCAGGGG TAGAAATCGA TCCAACGCTA GGTTTTAAAG GTCACTTTGG TGCTCTAGCC
ACTTACAAAC AAAAATACGG TGTAAAAACC CTGATCTCTA TCGGCGGATG GGCCGAAACC
GGCGGTCACT TTGATGCAAA TGGTAACCGT GTGGCTGATG GTGGCTTCTA CACTATGACC
ACCAATGCTG ATGGTTCCAT CAACCACGCA GCGATTGAAA AATTTGCGGC ATCTGCAGTT
GAGATGATCC GTAAGTACAA ATTTGATGGT GTGGATATCG ATTACGAATA CCCAACCTCC
ATGGCGGGCG CAGGAAATCC CGATGATAAA GGTTTTATGG AGCCACGTCG TGCTTACCTG
TGGGCTTCTT ACCAAGAGTT GATGCGTGTT CTGCGTGAAA AACTCGATCA AGCCTCGGCG
CAAGATGGCC ATCACTACAT GCTGACGATT GCCGCACCAT CTTCTGGTTA CTTATTACGT
GGTATGGAAA CATTCGATGT CACCAAGTAT CTCGACTACG TCAATATCAT GTCTTACGAC
TTGCATGGTG CGTGGAACGA TCACGTTGGT CACAACGCCG CGCTCTACGA TACAGGTAAA
GACTCTGAAT TGGCGCAGTG GAACGTTTAC GGTACAGCGC AATACGGTGG TATCGGTTAC
CTGAATACGG ACTGGGCATA TCACTACTTC CGTGGCTCAA TGCCTGCAGG TCGTATCAAC
ATTGGTGTGC CTTACTATAC CCGCGGTTGG CAAGGTGTCA CCGGTGGTGA GAATGGACTC
TGGGGCCGAG CGGCACTGCC GAACCAAAAT CTCTGTGCAC CGGGTACTGG TGAAGGGGAG
AAAAACAACT GTGGTCACGG TGCAACCGGT ATCGACAACA TGTGGCATGA CGTTAACGCT
GCAGGTGACG AAATGGGCGC AGGCTCTAAC CCAATGTGGC ATGCGAAGAA CCTAGAAAAA
GGCATTTGGG GTTCATACGC AGCGGCTTAT AAGCTCGATC CAACCACCAC ACCGCTGATT
GGTACTTATG TACGCAATTA TGACAGTGTG GCCGTGGCTC CTTGGTTGTG GAACGCAGAG
AAGAAAGTGT TCTTGTCGAC CGAAGATAAA CAGTCAATTG ATGTGAAAGC CGATTACGTT
ATCGACAAAG AGATTGGCGG TATCATGTTC TGGGAGTTGG CGGGTGACTA TAGCTGTTAC
AACCTTGATG CCAACGGCAA GCGCACCTCA GTGGACCCTT CTGAGCAAGC GTGTGCCACC
GGTAAAGGTG AGTACCACAT GGGCAATACC ATGACCAAAG CCATCTACGA CAAGTTCAAA
GTCGCCACGC CTTATGGTAA CAAGGTGGCA ACGGGCGCAA TCCCTGCTGA AGCGGTGAAT
ATTGCGGTGA AAGTCGGTGG CTTCAAAGTC GGTGACCAAA ACTACCCAAT CAATCCGAAG
ATTACCTTCA CCAACAATAC AGGGATTGAT ATCCCGGGAG GAACGGAGTT CCAATTCGAT
ATTCCTGTTT CAGCGCCAGA TAACGCGAAG GATCAATCGG GTGGCGGCTT GAAAGTGATT
GCATCAGGTC ATACCCGTGC CAATAACATT GGCGGGTTAG ACGGTACGAT GCATCGCGTG
GCGTTCTCTC TACCCGCTTG GAAATCACTT CCTGCTGGGG CAACCTATGA ATTGGATATG
GTTTACTACC TGCCGATTTC AGGTCCAGCG AACTACACAG TGAAAATCAA CAATGTGGAG
TACGCGTTTA GCTTTGAGCA ACCGGATCTC CCTGTCGCCG ATTTGACTGC AGGTGGCAAT
ACGGGAGGTA ATACCGGCGG TAACACTGGT GGTGGTACGG GTGGTGGCTC AACGGGTGAT
GTCATCCAGT GGGTTCCCGG TTCGACCCAA GTCCAAAATG GCACAACGGT GACTTACAAC
GGTAAATGCT TTGTAGCTCA AAATAACCCC GGCGTATGGG AATCACCGAC ACAATCTAAC
TGGTTCTGGA AAGAAGTGAC TTGCCCTCAG GCGTAA
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| Protein sequence | MRVLEGKAGK SVFTLSTLTA SCLMAFSSYA AVDCSTLPEW QSSAVYTGGA KVQHKGNAYQ
ANYWTQNNDP ETFSGNYAQW KLLDSCSTSG GTNQAPSVTL TAPLATAQVK AGEVMTLAAN
ASDADGSVAR VEFSVDGVLV GQATKAPYSA SWTATKGTHE FSAVAFDDKG AVSTKNAVTL
TVSDAGPANQ APTVAVALSA SSVDVGTVVT LSAEAADADG SVEKVDFYVG GALVGTSAKA
PYTLNYTATK AGSLAVYARA TDNLGAATDS ALTTLVVNGV APVANCRPDG LYQTEGVQVP
YCTVYDADGR EKMGVDHPRR VIGYFTSWRS GDDPQAAYLV KDIPWEQLTH INYAFVSIGS
DGKVNVGDVN DPNNAAVGKE WPGVEIDPTL GFKGHFGALA TYKQKYGVKT LISIGGWAET
GGHFDANGNR VADGGFYTMT TNADGSINHA AIEKFAASAV EMIRKYKFDG VDIDYEYPTS
MAGAGNPDDK GFMEPRRAYL WASYQELMRV LREKLDQASA QDGHHYMLTI AAPSSGYLLR
GMETFDVTKY LDYVNIMSYD LHGAWNDHVG HNAALYDTGK DSELAQWNVY GTAQYGGIGY
LNTDWAYHYF RGSMPAGRIN IGVPYYTRGW QGVTGGENGL WGRAALPNQN LCAPGTGEGE
KNNCGHGATG IDNMWHDVNA AGDEMGAGSN PMWHAKNLEK GIWGSYAAAY KLDPTTTPLI
GTYVRNYDSV AVAPWLWNAE KKVFLSTEDK QSIDVKADYV IDKEIGGIMF WELAGDYSCY
NLDANGKRTS VDPSEQACAT GKGEYHMGNT MTKAIYDKFK VATPYGNKVA TGAIPAEAVN
IAVKVGGFKV GDQNYPINPK ITFTNNTGID IPGGTEFQFD IPVSAPDNAK DQSGGGLKVI
ASGHTRANNI GGLDGTMHRV AFSLPAWKSL PAGATYELDM VYYLPISGPA NYTVKINNVE
YAFSFEQPDL PVADLTAGGN TGGNTGGNTG GGTGGGSTGD VIQWVPGSTQ VQNGTTVTYN
GKCFVAQNNP GVWESPTQSN WFWKEVTCPQ A
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