| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0610 |
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| Symbol | |
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| ID | 5134610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 665959 |
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| End bp | 667254 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530932 |
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| Product | sugar transporter family protein |
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| Protein accession | YP_001215449 |
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| Protein GI | 147671938 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.861991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA AAAAACACAT GAGCGAAGTT CCTATGATTC AAAGAGTAGC CGCCTATCTG
GCGATCTTGG TTGGTTACTT TTTCTATTGT TATAACTTTG TAATTATTGA CTACGTACGC
CCTTACATCG TTGAGGCTTA TGAGGGCATT AGCCTTTCAG ATACTGCTCA ATTCTATACA
TGGCAATCCG TTGGGGCGCT GATTGGCGCA TTAAGTTGCG CTTGGTTTGC TGGCCGCTTT
GGCAAGAAAT ACACCTTGAT CACGATTACT GCACTCAACG GCGGTGCAAC CATAGTGAAC
ATGATGTTTA CTGACTACGC GACATGGGCA GCGATGCGTT TCATCATAGG TTTGTCACTG
GGCGGCTACT TTACCGTCGC TGTCAGCTTA ATGATTGGCC TCTTTACCCC AACGGTTCGC
GGCAAACTGA CCGCATTTGC CTCATCCATG TTCTCTGTAG CTTTAATGGT AATGGGGGCA
TACGCGGCCT TTATCTCTAG CATAGATGCC CCCTGGGAAA GTTTGATGTG GGTTGGTGGA
ATTCCGCCTT TAGCTGCCGC ATTTGCCATG GTATTTGTCT TACCTAGCGA TAAAAACGTC
ATCGCTTACG GCGAAGAAGA TTCCTCAGCT AATACAGGGC AAAACACACC TGCGAAAAAA
GGCTCTTGGG GTGAAATGCT CAGCAAACCT TATCGGCTCC TTACCATCAC CTGTTTGCTT
CTAGCTGGCC TTAATTTTTA CGGTTTTCAA TTCTTTAGCG GTTTCGTCAC CACGTATTTG
AAAGAAGTTC GTCAGTTTGA TGGTGCAACA ATCGGTGTGA TCTTCTCAAT CTCCGCTTTT
GGTTCTCTAT TTGGAGCTTG GGTTTGGGGC GCGGTCGCCG ACAAATTTGG ACGTAAAGTG
AATGCGTTTG GCTTCATTCT TGCGGGCATC ATGGCTTCTA TCTTTTTCAT CGCACCGAGC
GATCTGATGA TTGGCAGCCT CAATATGCTG GCAATCTTGG GCTTAATTTA TAACTTTGGC
CTCTCGTCTT CAGCGGTTTG GGGTGGCTAC TTCTCAGAAT TATTCCCTGC TCATTTGCGC
AGTTATGGTG CTGCACTCTT CCACGGCGGG CGAATTATTG GAATGTGGGC ACCTATGGTT
CTCATTTTTA TCAAAGAGCG CACCGACTTA CAGACTGCAA TGTGGGGCTC ACCGATTGTG
TGGATAGTGG CTGGCTTATT ATGGCTATCG CTTCCAGAAA CATTAAAAGG CGGTTTATTC
GATAAACGTA AGAGCAACCA ACCGGCTAAC GCGTAA
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| Protein sequence | MTTKKHMSEV PMIQRVAAYL AILVGYFFYC YNFVIIDYVR PYIVEAYEGI SLSDTAQFYT
WQSVGALIGA LSCAWFAGRF GKKYTLITIT ALNGGATIVN MMFTDYATWA AMRFIIGLSL
GGYFTVAVSL MIGLFTPTVR GKLTAFASSM FSVALMVMGA YAAFISSIDA PWESLMWVGG
IPPLAAAFAM VFVLPSDKNV IAYGEEDSSA NTGQNTPAKK GSWGEMLSKP YRLLTITCLL
LAGLNFYGFQ FFSGFVTTYL KEVRQFDGAT IGVIFSISAF GSLFGAWVWG AVADKFGRKV
NAFGFILAGI MASIFFIAPS DLMIGSLNML AILGLIYNFG LSSSAVWGGY FSELFPAHLR
SYGAALFHGG RIIGMWAPMV LIFIKERTDL QTAMWGSPIV WIVAGLLWLS LPETLKGGLF
DKRKSNQPAN A
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