| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0608 |
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| Symbol | sdaA-2 |
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| ID | 5134072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 662698 |
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| End bp | 664128 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530930 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001215447 |
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| Protein GI | 147671532 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGTTTG TGCCATCATA CCTGATTGGC TTTATAACGC TTTATCTTAA GGGGAAAGTT
ATGCTCTCAA TCTTTGATAT TTACAAAATT GGGGTTGGCC CTTCCAGCTC GCATACCAAT
GGGCCGATGA TTGCAGGTTA CCGTTTTGTG CAGCAGTTAT TGCCACAGCT GAATAAAGTT
GCTCGCATAC AAGTGGATCT GTATGGCTCG CTGTCTTTAA CGGGGAAAGG GCACCACACT
GATCGTGCGA CCTTACTGGG CTTAATGGGG AATCAACCTG CCACCATCAA GATTGGTGAC
GCTAATCAGA CTCTACGTGA AGCGTTGCAA ACGGGTAAGT TGCGTCTCAA TGGTCAGCAT
GACATTGCCT TCGATTACCA TCAGGATCTT CTTTTTCATC AAGATAATCT GCCGCTGCAC
GAAAATGGTA TGACGTTGAG CGCGTTTGAT ACTCAAGGAC AACAGATTGA TTTTGAAACC
TATTATTCAG TCGGTGGTGG CTTTGTTGCG ACCGCTGAGC AGTTGCAAAA TGGTACCGCG
ACCGCCGATG TGACGGTGAC TTACCCCTTT ACCAGTGCCG ATGAAATGCT GCACCAAGCT
GAAAAACATG GTTTGAGTTT AGGCGGAATG ATTTTGCGCA ATGAACTGGC TTTTCAAGAG
ATGGCGGTGA TTGATGCCAA GGCCGATCAA ATCTGGCGAG TGATGAGCCA GTGTATGGAG
CGTGGTTTTG CGACCGAAGG CATTTTAGAA GGGGGATTAA ATGTCACTCG CCGTGCGCCG
AGTTTGCTGA AAAAACTTGA AGCCAATGCG GCGATTGAAA ATGATCCGAT GGAAGTGATG
GATTGGATTA ACCTCTTTGC TTTTGCGGTG AGTGAGGAGA ATGCCGCTGG TGGACAAGTG
GTGACATCGC CCACCAATGG AGCCGCGGGC GTCATCCCTG CAGTTTTGAT GTATTACCAC
CGTTTTATCA AAGCGCTCGA TACCAAGCAG CTTAAGGATT TTCTCGCTGT GTCTGGCGCG
ATCGGTATCT TGTATAAAAC CAATGCCTCC ATTTCCGGTG CTGAAGTTGG GTGTCAGGGT
GAAGTGGGCG TTTCTTCCTC CATGGCCGCC GCAGGCTTAA CGGCTTTGCG TGGTGGCAGT
AATGAGCAAA TCTGCATGGC GGCAGAAATT GCTATGGAAC ACTCATTAGG GATGACCTGC
GACCCGATAG GCGGTTTGGT GCAAGTGCCT TGTATTGAGC GTAACGCGAT GGGTGCAGTG
AAAGCGATAA ATGCTTCGCG CATGGCGCTC AAGCGAACCA GTAAGTGTCT GATTTCACTC
GACAAGGTGA TTGAAACCAT GTATCAGACT GGGAAAGATA TGAATAAAAA ATACCGCGAA
ACTTCGCTCG GAGGATTGGC GCTAATCCAT CTCGCGCCCC CTTGTGAATA A
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| Protein sequence | MRFVPSYLIG FITLYLKGKV MLSIFDIYKI GVGPSSSHTN GPMIAGYRFV QQLLPQLNKV
ARIQVDLYGS LSLTGKGHHT DRATLLGLMG NQPATIKIGD ANQTLREALQ TGKLRLNGQH
DIAFDYHQDL LFHQDNLPLH ENGMTLSAFD TQGQQIDFET YYSVGGGFVA TAEQLQNGTA
TADVTVTYPF TSADEMLHQA EKHGLSLGGM ILRNELAFQE MAVIDAKADQ IWRVMSQCME
RGFATEGILE GGLNVTRRAP SLLKKLEANA AIENDPMEVM DWINLFAFAV SEENAAGGQV
VTSPTNGAAG VIPAVLMYYH RFIKALDTKQ LKDFLAVSGA IGILYKTNAS ISGAEVGCQG
EVGVSSSMAA AGLTALRGGS NEQICMAAEI AMEHSLGMTC DPIGGLVQVP CIERNAMGAV
KAINASRMAL KRTSKCLISL DKVIETMYQT GKDMNKKYRE TSLGGLALIH LAPPCE
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