| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0601 |
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| Symbol | glpD |
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| ID | 5134463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 653449 |
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| End bp | 654987 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530923 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001215440 |
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| Protein GI | 147671426 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCTC GCTCAACACG TTTTACCCAA GATGAAGTGC TCGATTTGAT TATTGTTGGC
GGTGGCATTA ATGGCGCTGG CATTGCCGCA GACGCAACAG GGCGGGGATT AAAAGTTGGC
TTATACGATG CCAAAGATTT TGCCAGTGCA ACCTCTTCTG CCAGCTCAAA ACTGGTACAC
GGTGGTTTGC GCTATTTAGA ACATTATGAA TTTCGCTTAG TCAGTGAAGC ACTGGCGGAA
CGCGAAGTGC TTTTGAAAAA AGCACCGCAC ATCGTAACGC CGATGCGTTT TCGTTTGCCA
CATCGTCCTT TCTTACGCCC AGCATGGATG ATCCGCGCTG GTCTGTTTCT TTATGATAAT
TTGGGCAAAC GCACTTCCCT ACCTGCAAGT CACAAAGTCA ACTTAAAAGC GGGCAGCGTG
ACGAAACCTG AAATGCAAAT TGGTTTTGAG TATTCCGATT GCTGGGTTGA CGATGCTCGT
TTAGTTATCC TCAACGCCAT GCAAGCTCAA GAACAAGGGG CAGAAGTGTT GAACTACTGC
ACCGTCGAAA AAGCTGAGCG TATGGGCGAT TTATGGCATG TGACGCTACT GGATGAGCAG
ACTCAACAAC GCTTTGAGCG CCGTAGTCAT GCACTTGTGA ATGCCGCAGG CCCTTGGGTA
AAGCAGTTTT TAAACGAGAA TGCTCACGTC AGTTCCCCTT ACGGCATTCG TTTAATCCAA
GGCTCACACA TTATCGTGCC GCGCATTCAC GATGAGCCGC AGGCGTATAT TCTGCAAAAT
GAAGATAAAC GCATTGTCTT CGTCATCCCT TATCTTGATG CCTACTCGAT GATTGGCACA
ACCGATGTCG AATACAAAGG CGACCCAAGA AAAGTGGCGA TTACCGATGC TGAGCGTGAT
TATTTGATTT CGATTGTGAA CAAACATTTT ATGCGCGAAA TCGCGCGTTC AGACATCATT
GCTGAATTCA GTGGTGTACG CCCACTGTGC GATGACGAAT CGAACTCGCC ACAGGCCATT
ACTCGTGACT ATACACTGTC TCTGGATCAA CAAGCTGATG AAGCGCCGCT GCTGTCCATT
TTTGGTGGCA AACTCACGAC GTATCGCAAA CTAGGCGAAG CGGCGATGAA ACATCTCGCC
CCTTTCTTCC CGAAAATGAA AGCCCCTTGG ACAGAGGATG CTCCTCTGCC AGGTGGTGAA
AACTTTGACT ATGCAGCCTT AAAAAACCAG CTGGTGGTGG CCTTTCCTTT TATTACTGAG
TCAGTGATTG AGCGTTGGTT ACGCAGCTAT GGCAGCCGCA CCACGCAACT TTTGGCAGGT
GTGACAGGCA TTGAAGATCT CGGCATCGCG TTCAGCGGTG AGCTCTACCA AAAAGAGATC
GATTATCTGT GTGAGAAAGA GTTTGCCCGC CATGCACAAG ATATTTTCTG GCGCAGAAGC
AAACTCGGCT TAAATCACGA TACAAGTGTG GTTGAGGAAG TGGAGTCCTA TTTACAGCAG
AAATTCCACG CTGATCAGCC GCTAAAAGCG ACCGTGTAA
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| Protein sequence | MNARSTRFTQ DEVLDLIIVG GGINGAGIAA DATGRGLKVG LYDAKDFASA TSSASSKLVH
GGLRYLEHYE FRLVSEALAE REVLLKKAPH IVTPMRFRLP HRPFLRPAWM IRAGLFLYDN
LGKRTSLPAS HKVNLKAGSV TKPEMQIGFE YSDCWVDDAR LVILNAMQAQ EQGAEVLNYC
TVEKAERMGD LWHVTLLDEQ TQQRFERRSH ALVNAAGPWV KQFLNENAHV SSPYGIRLIQ
GSHIIVPRIH DEPQAYILQN EDKRIVFVIP YLDAYSMIGT TDVEYKGDPR KVAITDAERD
YLISIVNKHF MREIARSDII AEFSGVRPLC DDESNSPQAI TRDYTLSLDQ QADEAPLLSI
FGGKLTTYRK LGEAAMKHLA PFFPKMKAPW TEDAPLPGGE NFDYAALKNQ LVVAFPFITE
SVIERWLRSY GSRTTQLLAG VTGIEDLGIA FSGELYQKEI DYLCEKEFAR HAQDIFWRRS
KLGLNHDTSV VEEVESYLQQ KFHADQPLKA TV
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