| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0578 |
|---|
| Symbol | |
|---|
| ID | 5133959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | + |
|---|
| Start bp | 630361 |
|---|
| End bp | 631086 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640530900 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001215417 |
|---|
| Protein GI | 147671499 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2384] Predicted SAM-dependent methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAG GAAAACGGCT GACTCAGTTA GTCCAACAGG TAAAGCGCGA CTACGACCAT
ATTTGGGATT GCTGCTGCGA CCACGGCTTA CTCGGCGCAG CGTTGCTCAA ACAGCACCCA
AGCAGCACAG TGCATTTTGT CGATATCGTT CCGTCTTTGA TTGATAAGGT GACGCTCGAT
TTAATCCGCT ATTTTCCTGC CACGACCGAT TCACCACGCT GGCGCACTTA CTGTCTTGAT
GTACGCGATT TGCCACTCGA AGCCAACGCC GGATCGCATC TCGTCATCAT CGCCGGAGTA
GGCGGAGATT TGATGACGGA ATTTATTGCT GAGCTTGCCA AGCGTCACCC AAGCATGACG
TTTGATCTGC TGCTGTGCCC TGTTCACCAC ACTTATACCT TGCGCGAGCA GTTAATCGCG
CTGAATGCGG AGCTGAAAAG CGAGCGTTTA GTAGAAGAGA ATCAGCGCAT TTATGAGCTG
CTGCATGTGC AAATCTCTCC CAGCTCGGGG GCTTGCTCTC ACCCTCTCTC TTTGGTCGGT
GAGTTGCTGT GGCAAGTCAG CGGCACAGAT CAATCAAAGA TCGCGCAGCG TTATTTACAG
CAGTTGCAGC AGCACTATCA GCGCAAAGCA CAAGGTGGTG ATGCGGGCGC AGAGCAGCGT
TGGCAAGCGT ATCAGGCCGT GGAGATCCTT CACTCGATGG ATGCCACTCT AGAACTCGTT
CAATAG
|
|---|
| Protein sequence | MKLGKRLTQL VQQVKRDYDH IWDCCCDHGL LGAALLKQHP SSTVHFVDIV PSLIDKVTLD
LIRYFPATTD SPRWRTYCLD VRDLPLEANA GSHLVIIAGV GGDLMTEFIA ELAKRHPSMT
FDLLLCPVHH TYTLREQLIA LNAELKSERL VEENQRIYEL LHVQISPSSG ACSHPLSLVG
ELLWQVSGTD QSKIAQRYLQ QLQQHYQRKA QGGDAGAEQR WQAYQAVEIL HSMDATLELV
Q
|
|---|
| |