Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0505 |
Symbol | |
ID | 5134619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 561184 |
End bp | 561519 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640530827 |
Product | cryptic phage CTXphi transcriptional repressor RstR |
Protein accession | YP_001215344 |
Protein GI | 147671814 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.451167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGTT CAAAAATTAG GGATTTAAGA GTTGAGAGAG ATCTAAACCA AGAAGAAGTA GCAAATGGTA TCGGCGTTGG AAAAAATACC TATTTAGCTT ATGAAAAAGG CACACAATCA CCAAAACTGG AAACTGTAGA AAAATTAGCA AAATTCTATG GTGTACCAAT AGCTGAACTT GTCAGCGATA GCGAAACAAA CATTGACGAA AAGCTGAAAT CGAAAATCCG AATGATTGAA TCACTTGATG AACCAGAAAA AGAGTCATTA TTCATTTTGA TGGAGGCTTT GCTGATGAGA AGTAAGAGTC GAGAAATACA AAAAGAATTT AGGTAG
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Protein sequence | MFSSKIRDLR VERDLNQEEV ANGIGVGKNT YLAYEKGTQS PKLETVEKLA KFYGVPIAEL VSDSETNIDE KLKSKIRMIE SLDEPEKESL FILMEALLMR SKSREIQKEF R
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