Gene VC0395_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0505 
Symbol 
ID5134619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp561184 
End bp561519 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content35% 
IMG OID640530827 
Productcryptic phage CTXphi transcriptional repressor RstR 
Protein accessionYP_001215344 
Protein GI147671814 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.451167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGTT CAAAAATTAG GGATTTAAGA GTTGAGAGAG ATCTAAACCA AGAAGAAGTA 
GCAAATGGTA TCGGCGTTGG AAAAAATACC TATTTAGCTT ATGAAAAAGG CACACAATCA
CCAAAACTGG AAACTGTAGA AAAATTAGCA AAATTCTATG GTGTACCAAT AGCTGAACTT
GTCAGCGATA GCGAAACAAA CATTGACGAA AAGCTGAAAT CGAAAATCCG AATGATTGAA
TCACTTGATG AACCAGAAAA AGAGTCATTA TTCATTTTGA TGGAGGCTTT GCTGATGAGA
AGTAAGAGTC GAGAAATACA AAAAGAATTT AGGTAG
 
Protein sequence
MFSSKIRDLR VERDLNQEEV ANGIGVGKNT YLAYEKGTQS PKLETVEKLA KFYGVPIAEL 
VSDSETNIDE KLKSKIRMIE SLDEPEKESL FILMEALLMR SKSREIQKEF R