Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0411 |
Symbol | ectC |
ID | 5134305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 455231 |
End bp | 455647 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640530734 |
Product | L-ectoine synthase |
Protein accession | YP_001215252 |
Protein GI | 147672491 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000000478719 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGTTA GAACGCTAGA AGAGTGCCGC CAAAGTGAAC GTCGAGTGGT GGCAGAAAAC TGGGAAAGTG TGCGTATGTT ATTGAAAGAT GACCATATGG GGTTCTCTTT TCATATCACG ACCATCTACG CCAACACTCA GACGCATATT CACTACCGCA ACCACCTCGA ATCGGTGTAC TGCATGTCGG GTGAAGGCGA AATTGAGGTT GTGGGTGGTA AAACGTATCC GATCCAACCA GGAACCTTGT ACATCCTAGA TCAACATGAT GAACACTACT TGCGCGCTTT TTCTAGCGAG ATGGTGATGG CGTGCGTCTT TAATCCGCCA CTCACTGGAC ACGAAATTCA TGATGCGGAA GGTGTCTATC CGCTGGATAA AAGTGAATTG ATATCACAAT GTCATAAGGA GAAATGA
|
Protein sequence | MIVRTLEECR QSERRVVAEN WESVRMLLKD DHMGFSFHIT TIYANTQTHI HYRNHLESVY CMSGEGEIEV VGGKTYPIQP GTLYILDQHD EHYLRAFSSE MVMACVFNPP LTGHEIHDAE GVYPLDKSEL ISQCHKEK
|
| |