| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0405 |
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| Symbol | |
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| ID | 5134417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 448310 |
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| End bp | 449284 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530728 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001215246 |
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| Protein GI | 147671566 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00196923 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTTTCG TGCCACAGTG GTATTCTTGG CTCAGCTGTT CTCTGCATAG ACTTTTTATG
GATTATATTC ACCTCTCCCG ATTTAGCTTA AAACACCTGA CAGCCCTGCA TGTCATGCTC
AACACGCGCA GTGTTACCCA AACCGCCGCT CGACTGTGTG TAAGTCCATC CAGTATCAGT
AAAATCCTCG CTCAATTGCG TGAACTGCTT AATGACGACC TTTTTTACCG GGATGGAAAT
CAGTTAATCC CGACCCCTTA TGTACAGCAA ATGGGGCCAA CAGTGCATCA TGTTCTGTCC
AGTATGAATG GCTTATTGCA CTGCACCGAA TTCGATCCTC AGGCATACCA AGGCCACTAT
CGTTTAGCGA TGCGTGAAAG TACATTTGAG CTATTTGCGC CCAAAGTCAC TGCGATTCTC
GCCGCCTGCT CATCCGAGCT CTCCATGACG ATACACTCCA AAGAACATTA TGGATTTGAG
GCTTTGCAGA GTGGCTTGAT TGATTGCATT CTTTTGCCAC ATGACATCAG CCAGCCCCCA
ACCTTTGCCC AAGACTTAGT TTGGCAGGTA ATCGAATCGG ATGAGCTGGT CTGTTTGATG
AGTGCTGATC ATCCTCTTGC TCACGCTGAA CTCAGTGTCG ACGCCTACCT TGCTTATAAG
CACATCGGCA TTCTCGATAA TGAGCTCAAT GAGCCATATT TTGAGAAGTA CCTGACTCAG
CAACACGAAA CTCGACGCAT TGCTGTTGCC ACTCCTGACT TTGGTGCAGC GGCCATCTTG
TGTCGGCAGA CACATTTGCT GCTCACTTGT TCAAAGAGGT GGGCGGATCA CGCAATGCAA
GCTCAAGGCT TGGTGCAAAA AACCCTACCC TTTGAATATG GCAAGGTGGC TTATAGCTTA
GTCTGGAACA AACCCAGCAT GAATGACCGA GCTATTCGGT GGCTATGCCA GCAACTGAAC
AGCCAGTTAA CTTGA
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| Protein sequence | MIFVPQWYSW LSCSLHRLFM DYIHLSRFSL KHLTALHVML NTRSVTQTAA RLCVSPSSIS
KILAQLRELL NDDLFYRDGN QLIPTPYVQQ MGPTVHHVLS SMNGLLHCTE FDPQAYQGHY
RLAMRESTFE LFAPKVTAIL AACSSELSMT IHSKEHYGFE ALQSGLIDCI LLPHDISQPP
TFAQDLVWQV IESDELVCLM SADHPLAHAE LSVDAYLAYK HIGILDNELN EPYFEKYLTQ
QHETRRIAVA TPDFGAAAIL CRQTHLLLTC SKRWADHAMQ AQGLVQKTLP FEYGKVAYSL
VWNKPSMNDR AIRWLCQQLN SQLT
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