| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0402 |
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| Symbol | |
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| ID | 5134422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 446158 |
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| End bp | 447036 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530725 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001215243 |
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| Protein GI | 147672064 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0779916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGT CACAAATCGA AGCTTTTTGC ACTATCGCCA ATACAGGCTC CGTCTCTGAA
GCCGCGCGTC AACTCGATTG CAATCGTACT AAATTAAGCA TGGCGATCAA AGCGCTGGAA
AAAGAACTCA ATGTGGCGCT GTTTGTGAGA GCGGGTAACT ACTTAACCCT TTCCGAAGCG
GGCAAAGCCG TTTACAAAGA TTGCGAGAGT TTACTCATCA CAGCATCACG TATTCGCCAG
ACTTGCGCTC AAGCGTGCAG TGAATTTGCC GCCGAGATGT GGATCGCGCG TGATGATTCA
CTCCCAGACC ATTTTTGGCA AGATATCGCC AGCCAATTGC ACAAACTCTT TCCCAACACC
TCTTTTAATA TGGTTTTGGC CTCCAGTGGC GATTTAGCCA ACTTGGTCGC GACACAACAA
GTCAACTGCG CTTTCGGGGT CGATTATGAG CGCTTAGACG ATCCGCGCAT CACTTACCAA
CCTTTGGGTA AAATCCGCCT CATGTCGGTG TGTAATAGCC AGCATCCTTT GGTTAAACAA
AAACGAGTTA GCGATGAGGA ACTGCGTAAA TTTATGCAAG CCGTCATGGT CTATCTTAAT
GAAAAAGATA ATCCGAACCT GCAGCCTTTC TCCCGTCGCT ATATCGGCTT CTCAAGCTTT
GAATACATGC TCAATACAAT TTTGAGTGAG AATGCTTGGG GCGTATTGCC TGAGCCATTG
ATTCGTCACT ATTTACGCGA GCAGCAACTG ACCGTGATTA AACATACGTA CGGTCTCACG
CAAGAAGACT TCTGCTTATT CCAACCTATC GGAATGCATG ATAACCCTGC CATTCTCTGG
CTCAGTGATA AGGTGAGTGA TTATCTGTTT GATTTCTAG
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| Protein sequence | MNLSQIEAFC TIANTGSVSE AARQLDCNRT KLSMAIKALE KELNVALFVR AGNYLTLSEA
GKAVYKDCES LLITASRIRQ TCAQACSEFA AEMWIARDDS LPDHFWQDIA SQLHKLFPNT
SFNMVLASSG DLANLVATQQ VNCAFGVDYE RLDDPRITYQ PLGKIRLMSV CNSQHPLVKQ
KRVSDEELRK FMQAVMVYLN EKDNPNLQPF SRRYIGFSSF EYMLNTILSE NAWGVLPEPL
IRHYLREQQL TVIKHTYGLT QEDFCLFQPI GMHDNPAILW LSDKVSDYLF DF
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