| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0401 |
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| Symbol | |
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| ID | 5134747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 445068 |
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| End bp | 446021 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530724 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215242 |
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| Protein GI | 147671587 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3965] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.414063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGATTCC CCCATGAATC GCCAGAATGT GCGGCGAAAC CTACGAGGAA ATTAACGATG
TGTTCTCAAT CCAATTTTAA TGAAAAGCGT TTTTTAACGC TTTCTGCCCT TATCGCATCA
GGCTTTGCTG GCAGTGGTTT GCTAGTCGGT CTACTCGTCG GCTCTATGGT CATTGTCTTT
GATGGTGTCT ATTCGCTGGT GAGTTTACTG TTAACATTAT TGTCGCTGGC GGTATCACGT
TTTATTCAAA AACCGTCTGA CGCTCGTTTC CCTTTTGGGC GCGCAGTGTT AGAACCCCTG
GTTATCGCGA TAAAAGGTTT AGTGATCTTG CTGATTGTCA GCTATTCACT CTACTCCTCG
CTCACCGCTC TCCTCAGTGG CGGACGCGAA GTGGATCCTT CTATCGCCAC CTTATTTGGT
GTATTTAGCG TCACAGGCTG TGCTTTAGCT TGGTGGAAAA TGGCAGGCTT AAGCCGACGT
CACCCTTCCG GGCTGATTGC GGCAGAAGTC AAACAGTGGC AGATGGATAC CTTACTGAGT
TTAGTGGTCA TGGTTGGCTT TATTGCCGCT TGGTTAATCA ACCTAACCCC TTGGGCGCAT
TATTCGGTCT ACGCCGATCC GATGATGATG CTGTTGATGT CGTTTTACTT TATAAAACTT
CCACTTGGGA TGCTGAAATC CGCTCTGCGT GAAATATTGT TGATGGCTCC AAGCCACGAT
ATACAGCAAG CCGTATCACA CAGTGTTCAA GCCACGCAAG AGCACGCCGA ACAACCACTT
GAGCTTTACG GTGTGGCTAA AGTCGGACGT GAACTGTGGG TCGAAGTGGC GTTAAAAACG
GCCGAGGATG ATTCGGTTGA GGTAGAAGAT ATTCAGCGTA TCGAAAACCA CTTGCAGCAA
AGCTTGGCGG CATTACCTTA CCAATTGCAG CTCACGGTGA GCGTTGCTCG CTAA
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| Protein sequence | MRFPHESPEC AAKPTRKLTM CSQSNFNEKR FLTLSALIAS GFAGSGLLVG LLVGSMVIVF
DGVYSLVSLL LTLLSLAVSR FIQKPSDARF PFGRAVLEPL VIAIKGLVIL LIVSYSLYSS
LTALLSGGRE VDPSIATLFG VFSVTGCALA WWKMAGLSRR HPSGLIAAEV KQWQMDTLLS
LVVMVGFIAA WLINLTPWAH YSVYADPMMM LLMSFYFIKL PLGMLKSALR EILLMAPSHD
IQQAVSHSVQ ATQEHAEQPL ELYGVAKVGR ELWVEVALKT AEDDSVEVED IQRIENHLQQ
SLAALPYQLQ LTVSVAR
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