Gene VC0395_0391 details

Gene Information

• Locus tag: VC0395_0391
• ID: 5134630
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 436673
• End bp: 437287
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640530714
• Product: hypothetical protein
• Protein accession: YP_001215232
• Protein GI: 147671870
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACTGA CAGTGTGGTT ATCGCTATTT ACGATTTGTA TTTTAGGGGC GATGTCGCCG 
GGGCCGAGTT TGGCTATGGT GGCTAAACAC AGTTTGGCAG GGGGACGTAA GAACGGCTTA 
GCAGCTGCTT GGGCTCATGC GTTCGGGATT GGGGTGTATG CCTTTATTAC CCTGATCGGA 
TTGGCCGTCG TACTGCATCA ATCTCCTGTG CTGTTTAAAA CCATTAGCTA TGCGGGTGCC 
GCCTATCTTG CCTACTTGGG CTGGAACGCT TTGCGTTCAA AAGGTGGGGT CGCGGCTAAG 
TTAGAGTCGG GCGAGTCGGT CAGCGTATGG CAATCAGCTA GAGAGGGGCT ACTGATTTCT 
CTGCTCAGTC CTAAGATTGC GCTGTTTTTT ATCGCGTTGT TCAGTCAATA CGTCGCGGTA 
GGCTCGGATT TGACCAGTAA GGCGGCGATT GTCATCACTC CCTTAGTGGT TGATGGTCTT 
TGGTATAGCT TCATTACTCT GATTTTATCT TCGCCTCGTT TACTCGATAA ATTGCGCGCC 
CGTGCCGTGC TCATCGACAG GCTGTCTGGC CTGGTGCTGA TTGCGTTAGC GATCCGAGTG 
TTGTGGACGG TGTAA 

 

Protein sequence

MTLTVWLSLF TICILGAMSP GPSLAMVAKH SLAGGRKNGL AAAWAHAFGI GVYAFITLIG 
LAVVLHQSPV LFKTISYAGA AYLAYLGWNA LRSKGGVAAK LESGESVSVW QSAREGLLIS 
LLSPKIALFF IALFSQYVAV GSDLTSKAAI VITPLVVDGL WYSFITLILS SPRLLDKLRA 
RAVLIDRLSG LVLIALAIRV LWTV