| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0382 |
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| Symbol | |
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| ID | 5133998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 418057 |
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| End bp | 418740 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530705 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_001215223 |
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| Protein GI | 147671689 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCATT TTCAAAGTAT AGAAAAACAG TACTCATTGG GAGTTCAAAG CGTGCCAGCG
CTACGTGGTG TGAGCGGTGT GGTACAGCAA GGCGAGATGT TAGTGCTGTG TGGCCCCTCC
GGCTCGGGTA AAAGCACTTT GCTCAACATC TTGGGATTAC TTGACCCTAA TTACCAAGGT
GAAGTGGCAT TAGAGGGACG TGTATATCCA CGTAAGGGTA AGTCTGCCGC CTTACTGCGT
CGTACTCAGT TTGGTTTTGT GTTCCAAAAA TTCAACTTAG TATCCGTGAT GACGGCGCTA
GAGAATGTCG CCTATCCCTT GATGCTTAAT GGTTTTAGCC GTCGTGATCA GCACAAGTTA
GCACATGACA TGCTAACCAA GGTTGGATTA GAAGCGGTGA TGCAGCAGCG TCCAGATCAT
CTTTCCGGTG GTCAGCAGCA GCGTGTAGCG ATAGCTCGGG CGTTGGTTCA CAACCCGAAA
TTGGTGGTCG CGGATGAGCC TACCGCGAGT CTGGATAGTC AAACAGCCAA CCTCGTGATC
AGTTTAATGA AAAGTCTTGG TCATGAGTTA GGCACGACTT TTGTGGTTGC CACTCATGAC
GGGCGCATGG CAGCTCAGTG CGATCGCACC CTCAATCTGG TGGACGGACA AATTTCATTG
GAGGCGATGC AATGGGCAAG TTGA
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| Protein sequence | MLHFQSIEKQ YSLGVQSVPA LRGVSGVVQQ GEMLVLCGPS GSGKSTLLNI LGLLDPNYQG
EVALEGRVYP RKGKSAALLR RTQFGFVFQK FNLVSVMTAL ENVAYPLMLN GFSRRDQHKL
AHDMLTKVGL EAVMQQRPDH LSGGQQQRVA IARALVHNPK LVVADEPTAS LDSQTANLVI
SLMKSLGHEL GTTFVVATHD GRMAAQCDRT LNLVDGQISL EAMQWAS
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