| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0350 |
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| Symbol | |
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| ID | 5135029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 383080 |
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| End bp | 383841 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640530673 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001215191 |
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| Protein GI | 147671672 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR03541] LuxR family transcriptional regulatory, chaperone HchA-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGAAGT TGAGCAGAAA TAAAATAGAG CAGAAAGAAC CTATGCCCGC TGTCGATTTA
ATCACCTTGA TAAGCCAACT GGAAGAAAGC CATAGCTTTT CCACGGTTCA AGATATTGTT
CGGCAACGGG CGCATTTTTA TGGTTACGAT AAGATCGTGT TTTTCTCAGC ACACTCCACG
CTCGATGGCA TCATAGAGCG TATCTATTGG ATTGAAGGTG ATTGGTTTGA CGATGGAGAA
AACATTGATG CAGCGACTTA CATCAAATAT TGCCCTATAA CTCGTCATAT TATTGAAACG
GATCGTCCTT TCTTTTGGAC TAAAAAACCT GACGTCAATC GAGAACAATA CAGAGTGGTT
GCCAAACCCA AAGGTAGCGG CATACACGGC CTACAAATTC CTATTTTTGG CCATCTAGGA
CTAGAAGGAG CTGTGAGTCT AGGCGGTAAG GCAATAGATA GCTCACCGCG AGCTCGTTGT
GAACTTAGTC TTTTATCAAC TTATGCGTTT TTTGCGGCAC GTCGTCTGCT TGAGTCCTCA
GATCCAAACC GCTCAGCATT GCTCTCTAAA CGGGAAAAAG AAGTGCTGTC ATTGACAGCA
CTGGGACGCA GACAAGCCGA TATTGCTATA GCTCTTGGTG TTTCTCCCAG AACCATTGAA
AATCACTTGC GTAACGCCAG ACTCAAACTT GGTGGGGCAA CGACAGCCGA AACAATAAGA
ATTGCGATAC AACGGGGCGA TATCAATAGT CATTCAATAT GA
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| Protein sequence | MLKLSRNKIE QKEPMPAVDL ITLISQLEES HSFSTVQDIV RQRAHFYGYD KIVFFSAHST
LDGIIERIYW IEGDWFDDGE NIDAATYIKY CPITRHIIET DRPFFWTKKP DVNREQYRVV
AKPKGSGIHG LQIPIFGHLG LEGAVSLGGK AIDSSPRARC ELSLLSTYAF FAARRLLESS
DPNRSALLSK REKEVLSLTA LGRRQADIAI ALGVSPRTIE NHLRNARLKL GGATTAETIR
IAIQRGDINS HSI
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