Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0322 |
Symbol | hmuV |
ID | 5134027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 354903 |
End bp | 355682 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640530645 |
Product | hemin importer ATP-binding subunit |
Protein accession | YP_001215163 |
Protein GI | 147671953 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4559] ABC-type hemin transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00006173 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACTA TTGCAATTCA AGGCAGGGAT CTTTGTGTCA CCTACGGCTC TCGCCAAGTG CTCGATCATG TGGATATCAC CTTGCGCTGT GGCGAAGTCG CGGCGTTACT CGGTCCTAAC GGAGCCGGGA AAAGTACCTT ACTGAAGCTG CTCTGCGGTG AAATGAGCGG AGCAGGCAAA CTCGATTATT TTGGTGTTCC AGCATCGCAG TGGCCTGCCG AAAAACTGGC TAACCATTTG GGCATTTTGC CCCAGCAGAG CTCATTGACT TTTCCTTTTA CCGCGCAAGA AGTGGTTGAA CTTGGGGCTA TTCCACTCAA TCTACCGCGC AAAGAAGTAG AGCGTGTCGC CCGTCATTAC ATGCTCAAAA CCGATGTGTT ACACCTCGCA GCCAGTCTTT ACCCTTCTCT TTCTGGAGGT GAAAAGCAGC GCTTACATCT CGCGCGAGTA CTCACTCAAC TGCACCAAGC TGGTCAACAG CGTATTTTGA TGCTGGATGA GCCAACATCA GCACTCGATC TCGCTCATCA ACACAACACG CTGCAACTCG CGCGTCAGTT AGCCGATGAA GAACAATGTG CCGTCGTCGT TGTGTTGCAT GATTTAAACC TTGCCGCGCA GTACTCAGAT CGCCTGATCC TGCTTCATCA AGGCAAAATT GTATGTGATG CGGCACCTTG GCAGGCGCTG ACGGCAGAAA GAATTGAGCA GGTTTACGGC TATCAAGCGC TGGTTGCCGC CCATCCTACT CGTGATTTCC CAATGGTTTA TCCAGCTTGA
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Protein sequence | MQTIAIQGRD LCVTYGSRQV LDHVDITLRC GEVAALLGPN GAGKSTLLKL LCGEMSGAGK LDYFGVPASQ WPAEKLANHL GILPQQSSLT FPFTAQEVVE LGAIPLNLPR KEVERVARHY MLKTDVLHLA ASLYPSLSGG EKQRLHLARV LTQLHQAGQQ RILMLDEPTS ALDLAHQHNT LQLARQLADE EQCAVVVVLH DLNLAAQYSD RLILLHQGKI VCDAAPWQAL TAERIEQVYG YQALVAAHPT RDFPMVYPA
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