| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0312 |
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| Symbol | |
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| ID | 5134029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 344129 |
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| End bp | 345172 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530635 |
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| Product | AraC/XylS family transcriptional regulator |
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| Protein accession | YP_001215153 |
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| Protein GI | 147672403 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATGA TTCCAGTGCC CTTCGTGGTT TCGCTGATGC TGCTGTTATT GGCAGTAACG
CTCTATTTAC GACTGGCTGA GCAGGCAAAA AGTGCTTGTC TGTTTTTAGT GCTTTGTGCG
GCAACCACGG CTGTGGTTGG GTTACGTTGG ACGGTCGATT GGCCCGCACT GCGCATGGCA
CAACCTATTT TAGCTTCCCT CATTCCTGTT GCTGCGTGGT GTACCTTTAC TCGCACCCAT
GAAAAAGGCC TGTCGCGTTG TTATAAGCAC TTATTTGGCC CAACTCTGGT GTTGGTGAGC
TTGTTGGCTC AGCCATTTTG GTCGCTACCT CTGGATGAAA CTCTGACCGC GATCTATCTA
TTTTACGGGA TTGCGTTGGT GCGTTATTCC TCACAAGATG CGTTACGAAT CTATGTCGCG
TTTAACCATT GGGAAAACGT CAAACGGGCT GAAAATATCG CAGGTTGGAT GCTGCTGTTT
TCTGCATTGA TCGATAGCAC GATGTCTCTC GATTTCATCT ATAACCAAGG GCATTTTTCG
CTGTACATTT TGACCGTTGG GCATGTGGTA CTGATCCCTG TTTTGGCCTT CGCCGTGATT
GTGGTTGGTG TGAGTACATC CAGCACTGAT GAAGTCGCTA ATTCGGAACT GGCGACCTCG
CATGAAGAGA AAGAAACGTT AACCGATGAG GGGATGCCAG AAGCACGAGC ACAAGAGATT
GTGGCCTTGT TTGATCGGCA AATGAGGGAA AAAACGCACT ATTTAGATCC TGAACTGACC
TTATCTAAGC TGTCGCGCAA ACTCGGCATT CCCGCGAAAC AGATTTCGGC GGCGGTTAAC
CAAATCCATC AGAAGAATAT TTCCAAGTTG ATTAATGAAT ACCGAATTGA TCATGCGTTG
CAGGCGCTCA CCAAGAGTGA AGATTCCATC ACTCAGATTT TTATGAACTC GGGTTTTCAG
ACCAAATCGA ATTTCAACCG CGAATTCTCA CGAGTAACAG GGATGACCCC GAGCGATTAT
CGGAAACAGC ATCGGCAAAT CTAA
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| Protein sequence | MLMIPVPFVV SLMLLLLAVT LYLRLAEQAK SACLFLVLCA ATTAVVGLRW TVDWPALRMA
QPILASLIPV AAWCTFTRTH EKGLSRCYKH LFGPTLVLVS LLAQPFWSLP LDETLTAIYL
FYGIALVRYS SQDALRIYVA FNHWENVKRA ENIAGWMLLF SALIDSTMSL DFIYNQGHFS
LYILTVGHVV LIPVLAFAVI VVGVSTSSTD EVANSELATS HEEKETLTDE GMPEARAQEI
VALFDRQMRE KTHYLDPELT LSKLSRKLGI PAKQISAAVN QIHQKNISKL INEYRIDHAL
QALTKSEDSI TQIFMNSGFQ TKSNFNREFS RVTGMTPSDY RKQHRQI
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