Gene VC0395_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0302 
Symbol 
ID5134994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp336687 
End bp337625 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content52% 
IMG OID640530626 
Producthypothetical protein 
Protein accessionYP_001215144 
Protein GI147671624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.998017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCTG CCTCATCCCC CTACCCGATT GGCACTCCCG GTCAGCCTTG GCAAGCTGCA 
GAGCGCCAAG CTTGGCGAGA ACAACGCCAT ATTCAACGCG AATATCAACA AGAAGTAGTG
CCCAAGATTC TGGCCTTGAA CAGCCTATTC GACGTGAGTA CTTATGGCGC GCTCTCTTAT
GACCCAACAC GCTACCCGCT GTATGTAGTG AAAAGCCGCC ACTGGGATGC TAACAAGCCA
ACCGTATTGA TCACAGGCGG GGTACATGGT TACGAAACCA GTGGTGTACA CGGTGCGCTG
CAATTTTTAG CGACAGCCGC AGAGCCTTAT TTGGCTCACT TTAATCTGCT TGCCGCGCTC
TGTGTCAGCC CTTGGGGCTA TGAAACCATC AATCGCTGGA ACCCAAATGC TATCGATCCT
AACCGCTCTT TCGTTCAGGA TAGTCCTGCA GAAGAAGCAG CTCTATTGAT GGCGATGGTG
GCAGAGCACG GGCTGATTTT GCTGCATATT GATCTGCATG AAACCACCGA TACAGATGAA
TCTGAGTTTC GTCCTGCCTT GGCGGCGCGC GATGGTAAAG CCTATCTCGA AGGCTCGATC
CCCGATGGCT TTTACACGGT AGGTGATACG GAAAATCCGC AATTGGCTTT CCAACAAGCG
GTGATTGATT CGGTACGCCG TGTCACGCAT ATCGCGCCAG CGGATGAAAA CTATGAAATC
ATTGGTTCAC CTGTTGTCGC TGAGGGTGTC ATCCTCTATC CGATGAGAGA ACTCGGCTTG
TGCGGCGGCA TGACTGCTTG TACTTACAGC ACAACCACCG AAGTCTATCC AGATAGCCCT
AAAGTCACCG CACAACTCTG CAATGACGCG CAAGTCGCAG CCATCATCGG TGCACTTGAT
TATGTGCTTG CCAATGAGCA GAGTCTGCTA GGCGAGTAA
 
Protein sequence
MMSASSPYPI GTPGQPWQAA ERQAWREQRH IQREYQQEVV PKILALNSLF DVSTYGALSY 
DPTRYPLYVV KSRHWDANKP TVLITGGVHG YETSGVHGAL QFLATAAEPY LAHFNLLAAL
CVSPWGYETI NRWNPNAIDP NRSFVQDSPA EEAALLMAMV AEHGLILLHI DLHETTDTDE
SEFRPALAAR DGKAYLEGSI PDGFYTVGDT ENPQLAFQQA VIDSVRRVTH IAPADENYEI
IGSPVVAEGV ILYPMRELGL CGGMTACTYS TTTEVYPDSP KVTAQLCNDA QVAAIIGALD
YVLANEQSLL GE