| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0249 |
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| Symbol | |
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| ID | 5134665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 281123 |
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| End bp | 282457 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530572 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215090 |
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| Protein GI | 147671920 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATATGC AAACTTCAAC GTCTTCTTTA GCCAAGCAGT TATTTCAGAT GACTTGGCCT
ATGCTGTTTG GCGTCCTGTC ACTGATGAGC TTTCAGCTAG TTGACAGCGC TTTTATCGGC
CAGCTCGGGG TTCTACCTCT TGCAGCTCAA GGCTTTACCA TGCCGATTCA GATGGTGATC
ATCGGTATTC AAGTCGGTTT AGGTATCGCC ACTACAGCGG TGATTTCTCG AGCCATCGGT
GCAGGAAAAA CCGAATACGC TAAACAGTTA GGCGGTTTGG TGATCGTTAT CGGTGGTATT
GGCGTAGCGC TGATAGCCCT TGTGCTTTAC CTATTACGCC AACCTTTGCT TGGCCTGCTC
GGCGCACCGG AAACCGTCTT TGCCATCATA GATCACTACT GGCTCTGGTG GCTTGCCAGT
GCATGGACAG GCGCTATGCT CTACTTCTAT TACAGTGTCT GCCGCGCCAA TGGCAATACT
CTACTGCCAG GCACTTTGAT GATGGTGACC AGTGTGCTCA ACCTCATCCT CGACCCGATT
TTTATCTTTA CCTTCGACCT TGGGATTGAT GGTGCAGCGA TCGCGACCAT TATTGCTTTT
GGTGTCGGTA TCGCTATCGT CGCACCTAAG GTTGCCCAGC GCCAATGGAC GAGTTATCAG
TGGCAAGACC TCAATATCTC GCAAAGCCTC ACTGCGCTTG GCCATATCAT GGGGCCGGCG
ATGTTAAGCC AACTGTTACC CCCGCTCTCT TCGATGTTTG CCACCAAATT ACTGGCAAGT
TTTGGTACTG CCGCCGTCGC CGCATGGGCA CTTGGCTCAC GCTTTGAGTT TTTCGCCTTA
GTGGCCGTGT TAGCTATGAC CATGTCACTG CCGCCTATGA TTGGTCGCAT GTTAGGGGCT
AAAGAGATCA CCCACATTCG GCAATTGGTA CGGATCGCCT GTCAATTTGT GTTAGGTTTT
CAACTGCTGA TCGCTCTGGT GACGTATGTT TTTGCCACAC CGTTAGCTGA GCTGATGACC
AGCGAAACCG AAGTGAGCCA AATACTGAAT TTACACTTAG TGATTGTCCC GATAAGCCTC
GGCGCACTCG GGATCTGTAT GTTGATGGTA TCCGTCGCTA ACGCGCTTGG GAAGTCTTAC
GTGGCTCTGA CTATTTCAGC GCTGCGCTTA TTTGCTTTTT ACTTACCTTG TTTGTGGCTC
GGTGCCCATT TCTACGGGAT CGAGGGGCTT TTTATTGGTG CGTTAGTCGG CAATATTATT
GCTGGTTGGG CAGCATGGCT CGCTTATCAA AAAGCTTTAC GTCAGCTCGA AGGAGCGCAT
CACACCTCCG CTTAG
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| Protein sequence | MYMQTSTSSL AKQLFQMTWP MLFGVLSLMS FQLVDSAFIG QLGVLPLAAQ GFTMPIQMVI
IGIQVGLGIA TTAVISRAIG AGKTEYAKQL GGLVIVIGGI GVALIALVLY LLRQPLLGLL
GAPETVFAII DHYWLWWLAS AWTGAMLYFY YSVCRANGNT LLPGTLMMVT SVLNLILDPI
FIFTFDLGID GAAIATIIAF GVGIAIVAPK VAQRQWTSYQ WQDLNISQSL TALGHIMGPA
MLSQLLPPLS SMFATKLLAS FGTAAVAAWA LGSRFEFFAL VAVLAMTMSL PPMIGRMLGA
KEITHIRQLV RIACQFVLGF QLLIALVTYV FATPLAELMT SETEVSQILN LHLVIVPISL
GALGICMLMV SVANALGKSY VALTISALRL FAFYLPCLWL GAHFYGIEGL FIGALVGNII
AGWAAWLAYQ KALRQLEGAH HTSA
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