| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0236 |
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| Symbol | |
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| ID | 5134462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 269079 |
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| End bp | 269912 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530559 |
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| Product | AraC/XylS family transcriptional regulator |
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| Protein accession | YP_001215077 |
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| Protein GI | 147671559 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGAGCG ACTCAGCAGG CAAAATTAAA GAACAAGCAA AATTTCAGAT TGCCGAAGAA
TTTGGCGGCC TTGAGCTGCT TGATGCGCAA TACGAAACGC AGAATTTTTC TCGCCACAGC
CATGAAGGGT ATACCGTGGG TGTGATTGAG CGCGGTGCAC AATCTTTCTA CCGCACCGGC
GGCAACCATA TTGCGCCGCA AGACAGCATT ATTTTGGTCA ACGCCGATGA AGTGCATACC
GGACACTCCG CCGTCGAAGG TGGTTGGGCG TACAAAGCCA TGTACCCGCT GCCCGAGCAG
TTTGCCACGG TTGCCAAAGA GATTGGCGCC AATACCGGAG CGCCTTATTT TCCACAAGCG
GTGGTGTATG ATCCCGAGCT CGCGAGCCAA CTGCGCTTAG TGTTTGAAAC CCTTGAGAAA
TCGACTAACC GCTTGCTACG TGAAACCCTG ATTTACGCCA GCTTAGTCAA GTTGATGACG
CGCCACGGCC GCACTGCGCC AAAAACCGAT CAACCGCTAT CTGCACTGCG GCCATTGTTG
CTAGTTAAAG AGTTTCTGGA TGACTTTCCG CAGGCCGATG TTTCACTCGA AGAACTGGCA
CAACTGGCGG GATTAAGTCC TTTTCATCTG GTGCGGACGT TTCAAAAACA GTTTGGTTTA
CCACCCCACG CTTATCAAAT CCAAGCCCGC TTGCGCCTCG CGAAAACCCT GTTAAAGCAA
GGCGTGAGTA TCTCAGAAAC CGCGCAAGAG TGTGGCTTTC ACGATCAAAG CCATCTGCAT
CGCCACTTTA AAAAAGCGCT CGGCATCACT CCAAAACAGT ACGCAAGACC TTAG
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| Protein sequence | MMSDSAGKIK EQAKFQIAEE FGGLELLDAQ YETQNFSRHS HEGYTVGVIE RGAQSFYRTG
GNHIAPQDSI ILVNADEVHT GHSAVEGGWA YKAMYPLPEQ FATVAKEIGA NTGAPYFPQA
VVYDPELASQ LRLVFETLEK STNRLLRETL IYASLVKLMT RHGRTAPKTD QPLSALRPLL
LVKEFLDDFP QADVSLEELA QLAGLSPFHL VRTFQKQFGL PPHAYQIQAR LRLAKTLLKQ
GVSISETAQE CGFHDQSHLH RHFKKALGIT PKQYARP
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