Gene VC0395_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0194 
SymbolmtlR 
ID5134761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp226334 
End bp226915 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content45% 
IMG OID640530517 
Productmannitol repressor protein 
Protein accessionYP_001215035 
Protein GI147671432 
COG category[K] Transcription 
COG ID[COG3722] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGAG CTGTCACTCG CTCTCGACTT AACTCAACAA CAGATCAGTT TATGGCAGAA 
AAAATTAACG AATCCGACAT TCTGGAGCGC TTGAATCAGA CCCACACGGT ACGAGGATTC 
TTCATTACAA CGGTTGATGT GCTAACCGAA GCCATTGATG CACTGATGCA ACGTATTTTC 
CGTAAAGACA ATTTCGCGGT GAAATCCGTA GTTGAACCAC TCTTGCACGA TACAGGACCG 
CTGGGTGACC TAACGGTTCG CCTGAAACTT TTATTTGGTT TGGGCGTGAT CCCAGATGAG 
GTTTTCCACG ATATTGAACA CTTAATCAAA CTGCGCAATC AGCTCAATCA TGATGCAACC 
GAGTACCAAT TCACCGACCC GCAAATTCTC GCGCCAATCA AAGCACTCAA TCTGGTCAAA 
AAAATGGGCA TGTTGCATTT AAACGTCGTG GAGCCAGACG ACGATATTGA CCTCAGCTTT 
TACCACCTGC AATTGCAACG CCAACAGCAA GTGATCAAAT CTGGTCTCTC TCTGGCCATC 
ATTCAAATTT GTAATGCACT CAACAAAGAC AGCCCGTTTT AA
 
Protein sequence
MSRAVTRSRL NSTTDQFMAE KINESDILER LNQTHTVRGF FITTVDVLTE AIDALMQRIF 
RKDNFAVKSV VEPLLHDTGP LGDLTVRLKL LFGLGVIPDE VFHDIEHLIK LRNQLNHDAT 
EYQFTDPQIL APIKALNLVK KMGMLHLNVV EPDDDIDLSF YHLQLQRQQQ VIKSGLSLAI 
IQICNALNKD SPF