Gene VC0395_0189 details

Gene Information

• Locus tag: VC0395_0189
• ID: 5134491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 222023
• End bp: 222745
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640530512
• Product: hypothetical protein
• Protein accession: YP_001215030
• Protein GI: 147672533
• COG category: [R] General function prediction only
• COG ID: [COG0730] Predicted permeases

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATATT TAGGCGCGAG TGCGTGGATT GCCATGCTAT TGGTTTTCAT GGGTTCCTTT 
GTGCAGACCG CGATCGGCTT TGGGCTCGCG GTCGTTGCAT CGCCGCTGCT GTTTCTTATT 
TCGCCGGACT ATGTGCCATC ACCGATCTGC TTAGTCGCGC TGTTTATTTC GGTGCTCAAT 
GCGATGAAAC ATCGCGAGAG TATTTCGATT GGCGGCTTAA AAATGGCCTT AATTGGGCGC 
ATTCCGGGAT CGATTGTGGG TGGTTTGCTG CTGATGTGGA TTTCCACGCA GGCGCTGGCG 
CTGTGGCTTG GCTTGTTGGT GCTGTTTGCG GTGGCAGTAA GTTTGCTGCC ACTGCGCATT 
GAGCCGAACC CAACTCGAAT GGGGATTGCG GGCTTTTTCT CAGGCGTATT TGGTACCAGC 
AGTGGCATCG GTGGTCCTCC TATGGCGCTC CTGCTTCAGC ACCAAGAAGC TAATCAATTG 
CGCGGTAATT TGTCTGCCTT CTTCGTGTTT AGCTCGATCA TCTCTTTGAT GGTGCAGTGG 
CCGACGGGTT TTTTAACGTG GCACCATGTG CTACTGACTC TGCCGCTGAT CCCTGCGGCT 
TGGCTAGGCT ATGTGTTAGC CCGTAAAACC ACTCACTCAT TGCCAAAAGA AAAAATTCGC 
TTTGCGGCGC TGGCGCTCTG TTTGGTGAGT GGTGCGACTG CGGTGTGGCA TGGATTTTTC 
TGA 

 

Protein sequence

MEYLGASAWI AMLLVFMGSF VQTAIGFGLA VVASPLLFLI SPDYVPSPIC LVALFISVLN 
AMKHRESISI GGLKMALIGR IPGSIVGGLL LMWISTQALA LWLGLLVLFA VAVSLLPLRI 
EPNPTRMGIA GFFSGVFGTS SGIGGPPMAL LLQHQEANQL RGNLSAFFVF SSIISLMVQW 
PTGFLTWHHV LLTLPLIPAA WLGYVLARKT THSLPKEKIR FAALALCLVS GATAVWHGFF