| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0156 |
|---|
| Symbol | |
|---|
| ID | 5134341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | + |
|---|
| Start bp | 181532 |
|---|
| End bp | 181831 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640530479 |
|---|
| Product | putative anti-sigma F factor antagonist |
|---|
| Protein accession | YP_001214997 |
|---|
| Protein GI | 147671608 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGC ATACGGACAT CGATAGTCAC AATAAACACA TTACCATTTC GATTGAAGGT
GCTTTTTGCT TCAACCTTGT CCACGATTTT CGTGCAAGTT ATGCCAAACG GCATGATCAC
CGATTCACCA TAGATTTACG CAAAGTCGAC TATATCGATA GTGCTGGGCT TGGCATGTTG
CTCAATATGC AGAAATACCT TGAGCAAGCG GACGGCGCGA TTCGGATTGT CAATGTCTTA
CCTCAGGTAA GAAAAATCCT CCTGATATCG CGCTTTAATA AGAAATTCGA TATCGAATAA
|
|---|
| Protein sequence | MSVHTDIDSH NKHITISIEG AFCFNLVHDF RASYAKRHDH RFTIDLRKVD YIDSAGLGML
LNMQKYLEQA DGAIRIVNVL PQVRKILLIS RFNKKFDIE
|
|---|
| |