| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0145 |
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| Symbol | |
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| ID | 5134084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 170110 |
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| End bp | 171675 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530468 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_001214986 |
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| Protein GI | 147671855 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTATGTT ATAACATTTT AATTAAGGAC ATTTTGATGA AAAAAAGGTT GTTCGGTTTG
ATTTTAGCGC TAGGAGGTGC AGGGATTTGG TTGACGAAAA CGGAGCCTGC ACCGAGTTCG
CTGGAGATTT CAGGCCCCTT TGAGTTTAAC AGCCAAGATT TAGCCAAGGA CGGATTCCTG
TTTTCGCGTC TACAAGTGGT TGAATCCTTG GTTGGCATCA ATGAGAACTC ACAACCATAC
CCTTTGCTGG CAAAAAGCTG GACGGTAAGT GATGATGGAT TAGTGTGGCG TTTCCAAATA
CGTCCTGAAG TACAATTTCA CGATGGCAGC CAATTGACGG CACAAGCGGC GGCGACGGCT
CTTAATCATG CGCTAGGTAA GCCGGGAGTA ATAAAACAAG TACCGATCAA GGCGATTACC
GCGCAAAACG ATCAAGTGGT GATTGAACTT AACACTGTCT ATCGCCCGCT CGCAGCGGTG
CTTGCTCACT ACTCGCTCGC GATTGCCTCC CCCAGCTCTT ATGATGCCAG TGGTAACGTG
ATTCGGCTCT TAGGCACGGG GCCTTATCAA ATCGCACAGT TGCAAGCGCC TCATAAAGCC
AGTGTTATCC GCTTTAACGC TTATTGGGGT AAACCCGCCA GTATCGAAAC CATCAATTAT
CTGGCAGGCC ATCGCTCAGA AAGCCGCGCT TTGTTAGCAC AAACTGGGCA AGCCGATCTG
GTCTACACCC TTGACCCTAT TAGCATTCCG AGTTTACAAC AGAGCCACAA TCTGGATCTC
TACATTGAGT CGATGCCGCG TACAGTTCTG ATCAAACTCA ATAACGAACA CCCTTTGCTT
AATCACGCCG ATGTTCGTCA AGCAATCAGT TTGGCAATCA ATCGTGAAGG TATTGCTCAA
TCGGTACTTA AGTTACCGGG ATCAGAAGCG CATCAACTCT TTTCTCCCGC ACTCGGAGCT
TGGCACTTAG CAGACAAAAC ACAGCCGCAG CGTCATTTAG CGACCGCGCA AACCCTGCTA
GCCAATCAAG GCTGGACGCT CAATGACCAA GGTTTACTGG AGCGAGAAGG CCAAGCGTTC
CGAGTTCAAT TGCTGACTTA TGCTGATCGC CCTGAACTAC CTTTGATCGC CACCGCGCTA
CAAGCCCAGC TCAAAGAGAT TGGTATTCAA GTGGATATTG CGATCGATAA CTCAAGTGCC
ATCCCCGCCA AACATCATGA TGGCACCCTA GAAATGGCCT TGATTGCCCG CAACTTCGGT
ACTATTGCCG ATCCTCTGCC ACTGCTTTTG AGTGATTTTG CAACGCATCA AGGATCGGAT
TGGGGCCCAA CCAATTGGTC ATCACCTCAG TTTAGCCAAC TGCTGGCTGA GCTTTCGACC
GAATCAGACA ATGCGCGTTA TCAGCAATTG GCCGCCCAAG CCTCTCAATT ACTGGCCGAT
GAGATGCCGC TCATCCCTGT GACTTATTAC CGCCAGATTG TGTCGGTCAA TAAACGAGTC
GCTGGATTTT CGTTTGATCC CTTTGAAATT AACTACCGCG TCGCGCAGAT GAGTTTCAAT
GACTAA
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| Protein sequence | MLCYNILIKD ILMKKRLFGL ILALGGAGIW LTKTEPAPSS LEISGPFEFN SQDLAKDGFL
FSRLQVVESL VGINENSQPY PLLAKSWTVS DDGLVWRFQI RPEVQFHDGS QLTAQAAATA
LNHALGKPGV IKQVPIKAIT AQNDQVVIEL NTVYRPLAAV LAHYSLAIAS PSSYDASGNV
IRLLGTGPYQ IAQLQAPHKA SVIRFNAYWG KPASIETINY LAGHRSESRA LLAQTGQADL
VYTLDPISIP SLQQSHNLDL YIESMPRTVL IKLNNEHPLL NHADVRQAIS LAINREGIAQ
SVLKLPGSEA HQLFSPALGA WHLADKTQPQ RHLATAQTLL ANQGWTLNDQ GLLEREGQAF
RVQLLTYADR PELPLIATAL QAQLKEIGIQ VDIAIDNSSA IPAKHHDGTL EMALIARNFG
TIADPLPLLL SDFATHQGSD WGPTNWSSPQ FSQLLAELST ESDNARYQQL AAQASQLLAD
EMPLIPVTYY RQIVSVNKRV AGFSFDPFEI NYRVAQMSFN D
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