| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0144 |
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| Symbol | |
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| ID | 5134458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 169161 |
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| End bp | 170117 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530467 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_001214985 |
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| Protein GI | 147672169 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGA TTCTTGTTCA CCGTTTTTAC CAGGCCCTCT TTGTGGCCTG GTCCGTCGGC
ACACTGACCT TTATTTTGAT GCGCTTTATT CCGGGTGATG TGGCTTATCG CATTGCAGCA
GGTCGCTATG GCTATGATTA TGTCAATGCC GACGCCGCAC TTGCAGTGCG TGCTGAGCTA
GGGCTGGATC GCTCCGCTTT TGAGCTTTAC TTGCAATGGC TATGGGATTT ACTGCATCTT
AATTTAGGCC ATTCTCTGGT CAGCAGTGAA CCCGTCATTC ATGCGATTAT GCATAATCTC
GGACACAGCC TTTTACTTGC AGGCGCTGCA ACACTGCTCT CGCTGTTTAT CGCGATCCCA
ATTGGGGTCT ATTGCGGTAA ACGTACCGAT CGGTGGGCAG ATAACCTTGC CCTGCTCACC
TCAATCATGA TTAAAGCGCA GCCAGTATTT TTGATTGGTC TGGGGCTTGT CATCCTGTTT
GCTTTACAAC TGAATTGGTT GCCTGTTGCT GGATTTGGTC ATCCCAAATT CCTTATTCTG
CCTGCGCTGG CTTTAGCGCT GGGTATGGCA GCGATGTCGA GTCGCATGAT CCGTAATGCC
ACTGCTCAAG TGTTGCAATC CCCCTATTAC GCTTTCGCGC GTTTGAAAGG TTTGAATCAC
GAGCAAGCCT TTACGCGCCA CGCACAGCGT AATATCGCCC TTCCTGTTAT GGCGTTTGTC
GGCATTCAGG CGGTGAGCTT AGTAGAAGGG ATAGTGATGA TTGAATCGCT GTTCTCTTGG
CCCGGTGTGG GACATGCCTT GTCACATGCG ATTTTCCAAC GCGATATTCC AATGATCCAA
GGCTCTGCAC TGGTGATGGG ATTATTGTTT GTCGCGCTCA ATACGCTGGT CGACTTAGTC
CAATACGCAT TAGACCCTCG CCTACGTTTA AGCCGACATG TTCAACCAGA GGCCTAA
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| Protein sequence | MTKILVHRFY QALFVAWSVG TLTFILMRFI PGDVAYRIAA GRYGYDYVNA DAALAVRAEL
GLDRSAFELY LQWLWDLLHL NLGHSLVSSE PVIHAIMHNL GHSLLLAGAA TLLSLFIAIP
IGVYCGKRTD RWADNLALLT SIMIKAQPVF LIGLGLVILF ALQLNWLPVA GFGHPKFLIL
PALALALGMA AMSSRMIRNA TAQVLQSPYY AFARLKGLNH EQAFTRHAQR NIALPVMAFV
GIQAVSLVEG IVMIESLFSW PGVGHALSHA IFQRDIPMIQ GSALVMGLLF VALNTLVDLV
QYALDPRLRL SRHVQPEA
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