| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0137 |
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| Symbol | |
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| ID | 5134814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 161408 |
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| End bp | 162205 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530460 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001214978 |
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| Protein GI | 147671487 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.122699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATTC ATCAACAATA TGTGTTGTTA ACGGGCGCTT CAGGTGGCAT TGGCGAGCCT
ATCGCCCATA CTTTAGCGGC GCGTGGTGCG CGGTTAATCT TGTTAGCGCG TGATGCGCAA
AAACTTGAAG CATTGCGTCA ATCACTCCCC AAGCCTGAGC TGCATCGGGT TGTGAGCGCA
GATTTAACCA GTGAAGCGGG AATGGAGCAA CTGCAGGCTT TGGTGGAAGA ATTAAACCGC
GCCCAGCAGC GCATCGCCGT CGTGATCAAT AATGCAGGGA CCAATCAGTT CTGTTTGTTG
GCGCGTCGTT CGATGGAGTC GGTGCAGCGT GAGTTAGCTC TGAATTTAAT GACGCCAATC
CAAATCATGC ACCATGTTTT GCAATGGAGC CGTAAACCGC AGATGGTCAT CAATATTGGT
TCCAGTCTCG GGGCGATAGG GTATCCGGGC TATGCCAGCT ATTGTGCCGC GAAAGCGGGA
TTGCACCGTT TTAGCGAAGC GATGAACCGA GAGCTCGCGG GGACGGGAAT GAAAGTGCTC
TATTTAGCGC CACGAGCCAC CAATACTTCG CTCAACAGTG AGGCCGTTCA ACAGCTCAAT
CGAGCACTGG GGAATCGCAG TGATGAGCCT TCCTTGGTTG CTGCGCAGGT GGCCAAAATG
ATTGAAACGG AGCAAAACGT CATGTGGATC GGTTGGCCGG AGAAACTTCT GGTGCGTCTT
AACCAACTAC TGCCGAGCTT GGTTTCTCGG GCAATTAGAA AGCAACAACC CGTCTTATTG
TCATTTTTAA ATCGCTAA
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| Protein sequence | MDIHQQYVLL TGASGGIGEP IAHTLAARGA RLILLARDAQ KLEALRQSLP KPELHRVVSA
DLTSEAGMEQ LQALVEELNR AQQRIAVVIN NAGTNQFCLL ARRSMESVQR ELALNLMTPI
QIMHHVLQWS RKPQMVINIG SSLGAIGYPG YASYCAAKAG LHRFSEAMNR ELAGTGMKVL
YLAPRATNTS LNSEAVQQLN RALGNRSDEP SLVAAQVAKM IETEQNVMWI GWPEKLLVRL
NQLLPSLVSR AIRKQQPVLL SFLNR
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