| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0135 |
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| Symbol | |
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| ID | 5134040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 159149 |
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| End bp | 160672 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530458 |
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| Product | putative long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001214976 |
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| Protein GI | 147672442 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.395126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGAA TTCTCGCTGC GCTGCAGCAG CATGCCTTGC ACCAACCGCA GAAAATGGCT
TTTGTTGGCC ATAACGCTCA GCAAGAGAGG ATAGCTCTCA ATTATTCTCA ACTGTTAGAG
CGAGTCGACC TGATCGCTAA TCAGCTGCAG CGGTTATCCG CAAACTGCAT CGCATTACGT
GCACAAAACA GTGTCGACTG GGTTGCGCTC GATTTAGCCG CGATGTGGTC ACACATCGTT
ATGGTTCCTG TCCCGACCTT TTTTACATCA GAACAAGTCG CTCATTTACT GAATGAGGCG
AATGTTGAAC TCTGTCTTGG TGATTGGCCT GAGTTGGGTT CGCCTTCACT GACAGTCGGT
GGCTTTGACG CTTGGCACTA TCAGGGCAAT AAACCGAGGA ATAGACCCAA TCGCGTTTTG
GCGGGTACAC AAAAAATCAC GTTCACCTCT GGCTCAACAG GCACCCCGAA AGGTGTTTGT
TTGAGTGAAG AAAATCTAGA GCGCGTTACG CTGGCCATCG CAGAGCAGAT GAGCGCGCAA
GTTGAGCAGC ATTTGGTGAT GTTGCCGCTC GCCACGCTGC TGGAAAATAT CACAGGAATT
TACGTGCCTT TGTTGCTCGG GGTGACTTCA AGCGTACTGT TTGGTGAATC GGTAGGGCTG
TCTGGCTCTA GTCAATTTTC TCCCACTCAG TTTGCCAACG TATTGAGCGT TTATCAGCCA
TCCAGTTTGG TTCTTACCCC AGCGTTATTG ATGGCGCTGA TTCAGGTGGT GAAACAGGCT
CCCGAGTTGG CGAAGTCGCT GCAATGGGTG GCGGTAGGGG GCGCGCGCGT TGCGGCTGAA
CTTATCCATA GCGCACGAGC TCTGGGCATT CCTGCTTATG AAGGCTATGG ACTTTCTGAA
TGCGCTTCGG TGGTTAGCAT GAATACACCG CAACATGACC AGCCCGGTAG TTGTGGCAAG
CCGCTGAGCC ATCTACAAAT CCAATTGGCT GAAGATGGTG AATTGTGGGT TCGTGGCAAT
AGTGCGCTGG GTTATATCGG CGAGCCATTG ACCGACGAAT GGCTTGCCAC GGGTGATCTG
GCGACACTCG ATGAGCAGGG ATTTCTTTGT ATCGTAGGGC GCAAAAAAAA TCTCATCATT
ACTCCGTTTG GGCGCAACAT CGCACCGGAA TGGATTGAGT CTCACGCGCA AGTTTGGTTA
CCGCAATGCC GTTTCGTGGT GGTCGGCGAT GATGAGGTGG GGTTAGTGGC TGTGATTGAT
CGCCTAATGC CCGATCTGGA GCAACGTGTG CAACAAATAA ATCATCAGTT ACCCGACTAC
GCACAGATCC AACAACTGCT TTTCGTCAAT CAGCCGAGCG CATGGCAGGC TTGGTTGACG
GCCAATGGCC GACCCAAGCG AGCGTTGATT GAGAACGCGC AGCACACTTT TCGTCGAGTG
CGTAATGCGC CCGACCTCAA TTGGCAATAC CTGTATCCCC TTCCGGCAAG AAGCGGTAGC
GGTATTGGCG ACATTTCACG GTAA
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| Protein sequence | MNRILAALQQ HALHQPQKMA FVGHNAQQER IALNYSQLLE RVDLIANQLQ RLSANCIALR
AQNSVDWVAL DLAAMWSHIV MVPVPTFFTS EQVAHLLNEA NVELCLGDWP ELGSPSLTVG
GFDAWHYQGN KPRNRPNRVL AGTQKITFTS GSTGTPKGVC LSEENLERVT LAIAEQMSAQ
VEQHLVMLPL ATLLENITGI YVPLLLGVTS SVLFGESVGL SGSSQFSPTQ FANVLSVYQP
SSLVLTPALL MALIQVVKQA PELAKSLQWV AVGGARVAAE LIHSARALGI PAYEGYGLSE
CASVVSMNTP QHDQPGSCGK PLSHLQIQLA EDGELWVRGN SALGYIGEPL TDEWLATGDL
ATLDEQGFLC IVGRKKNLII TPFGRNIAPE WIESHAQVWL PQCRFVVVGD DEVGLVAVID
RLMPDLEQRV QQINHQLPDY AQIQQLLFVN QPSAWQAWLT ANGRPKRALI ENAQHTFRRV
RNAPDLNWQY LYPLPARSGS GIGDISR
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