Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0110 |
Symbol | |
ID | 5135025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 123622 |
End bp | 124662 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530433 |
Product | hypothetical protein |
Protein accession | YP_001214951 |
Protein GI | 147672387 |
COG category | [S] Function unknown |
COG ID | [COG3274] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGAGTG TCGTTATGTC AAACCATCAG AAAATCGCCA GCCTTGAACT TGGGCGAGTG ATCGCCATGC TGGCCATTAT TGCTTTGCAT TGCCAACTGT TTACCACTTA TTGGTTCCTC GATGATGAAC CGTGGGTAGC TTATTTATTT AACCAATCCA CCCGCTTTGC TGTGCCACTG TTTTTCCTTA TTTCAGGCTA TTTAATTCAA CCCAAACTCA GCCACAACCC AATGCAAACC TTGCGTAATT ACTGCTCGCC ATTACTGAGG ATATGGGTGA TTTGGAGTGT AATTAGCCTA TTAATGCCCT TCAATCTCGA AGTGATGGTC AATCAAGGCT ACCTTGCCGA ACGCTCTGGC TATTGGGGAT TTTTGCTGCA ACACCCGCTT AACTCACTGT TTGAAGGCGG ACTGGTACAC CTTTGGTTTT TACCCGCACT GATGATTGCG GTTGCCATCA TGGCACTGTT GATCCGCCAA CAAAAAACAC ACTGGATGCT ACCGATTGCC ATCGGGTTAT ACCTCTACGG TGAATTTGCA GGAAGCAGCG CCGTCGTCAC TGGCATGAGC GCGCCCATCT ATACTCGTAA CGGCCCATTT TTCAGCACCT TGTTTGTCGT GGTCGGTTAT CTGATTCGTG AAAGGCACAT CCTGTGGCAA TCGCGCTCTG CGTTGTTATT GGCGATGCTG GGAATGGCTT TTCACTTCGT CGAAGCCTAT GGCTTACATC AGTATGGGCA GGTGTTTAAC ACCAATGATT ATCTGTTTGG CACCACTTTG TGGGCGATTG GGCTGTTTCT TTTCCTACTC GCTAAACCCG ATCTAGGCCG GAAGCCTTGG GGATTTTCAC TGTCACAAAG CATCCTCGGC TTTTACGTCA GTCACTTGTT AGTGGTGATC ATGATGATGA ACCTTGCCAG ATTTTTAGGG CTTGCTGGAT TAGAAAAAGA CACACTGGTT CTATTTGGCA CTTTGCTCAC CACTTATCTA CTCGTTAAAG GCTTAGAACG TACACCACTT AAGCACCTGT TATTTCGATA G
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Protein sequence | MPSVVMSNHQ KIASLELGRV IAMLAIIALH CQLFTTYWFL DDEPWVAYLF NQSTRFAVPL FFLISGYLIQ PKLSHNPMQT LRNYCSPLLR IWVIWSVISL LMPFNLEVMV NQGYLAERSG YWGFLLQHPL NSLFEGGLVH LWFLPALMIA VAIMALLIRQ QKTHWMLPIA IGLYLYGEFA GSSAVVTGMS APIYTRNGPF FSTLFVVVGY LIRERHILWQ SRSALLLAML GMAFHFVEAY GLHQYGQVFN TNDYLFGTTL WAIGLFLFLL AKPDLGRKPW GFSLSQSILG FYVSHLLVVI MMMNLARFLG LAGLEKDTLV LFGTLLTTYL LVKGLERTPL KHLLFR
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