Gene VC0395_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0110 
Symbol 
ID5135025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp123622 
End bp124662 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content47% 
IMG OID640530433 
Producthypothetical protein 
Protein accessionYP_001214951 
Protein GI147672387 
COG category[S] Function unknown 
COG ID[COG3274] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGAGTG TCGTTATGTC AAACCATCAG AAAATCGCCA GCCTTGAACT TGGGCGAGTG 
ATCGCCATGC TGGCCATTAT TGCTTTGCAT TGCCAACTGT TTACCACTTA TTGGTTCCTC
GATGATGAAC CGTGGGTAGC TTATTTATTT AACCAATCCA CCCGCTTTGC TGTGCCACTG
TTTTTCCTTA TTTCAGGCTA TTTAATTCAA CCCAAACTCA GCCACAACCC AATGCAAACC
TTGCGTAATT ACTGCTCGCC ATTACTGAGG ATATGGGTGA TTTGGAGTGT AATTAGCCTA
TTAATGCCCT TCAATCTCGA AGTGATGGTC AATCAAGGCT ACCTTGCCGA ACGCTCTGGC
TATTGGGGAT TTTTGCTGCA ACACCCGCTT AACTCACTGT TTGAAGGCGG ACTGGTACAC
CTTTGGTTTT TACCCGCACT GATGATTGCG GTTGCCATCA TGGCACTGTT GATCCGCCAA
CAAAAAACAC ACTGGATGCT ACCGATTGCC ATCGGGTTAT ACCTCTACGG TGAATTTGCA
GGAAGCAGCG CCGTCGTCAC TGGCATGAGC GCGCCCATCT ATACTCGTAA CGGCCCATTT
TTCAGCACCT TGTTTGTCGT GGTCGGTTAT CTGATTCGTG AAAGGCACAT CCTGTGGCAA
TCGCGCTCTG CGTTGTTATT GGCGATGCTG GGAATGGCTT TTCACTTCGT CGAAGCCTAT
GGCTTACATC AGTATGGGCA GGTGTTTAAC ACCAATGATT ATCTGTTTGG CACCACTTTG
TGGGCGATTG GGCTGTTTCT TTTCCTACTC GCTAAACCCG ATCTAGGCCG GAAGCCTTGG
GGATTTTCAC TGTCACAAAG CATCCTCGGC TTTTACGTCA GTCACTTGTT AGTGGTGATC
ATGATGATGA ACCTTGCCAG ATTTTTAGGG CTTGCTGGAT TAGAAAAAGA CACACTGGTT
CTATTTGGCA CTTTGCTCAC CACTTATCTA CTCGTTAAAG GCTTAGAACG TACACCACTT
AAGCACCTGT TATTTCGATA G
 
Protein sequence
MPSVVMSNHQ KIASLELGRV IAMLAIIALH CQLFTTYWFL DDEPWVAYLF NQSTRFAVPL 
FFLISGYLIQ PKLSHNPMQT LRNYCSPLLR IWVIWSVISL LMPFNLEVMV NQGYLAERSG
YWGFLLQHPL NSLFEGGLVH LWFLPALMIA VAIMALLIRQ QKTHWMLPIA IGLYLYGEFA
GSSAVVTGMS APIYTRNGPF FSTLFVVVGY LIRERHILWQ SRSALLLAML GMAFHFVEAY
GLHQYGQVFN TNDYLFGTTL WAIGLFLFLL AKPDLGRKPW GFSLSQSILG FYVSHLLVVI
MMMNLARFLG LAGLEKDTLV LFGTLLTTYL LVKGLERTPL KHLLFR