| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0106 |
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| Symbol | chiA-2 |
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| ID | 5134588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 117139 |
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| End bp | 119685 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530429 |
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| Product | chitinase |
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| Protein accession | YP_001214947 |
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| Protein GI | 147671910 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGAA TGACTTTGTG CGCCGCAAGT ATCGCTTGTG CTTTAGCGAG TACGGCGATG
GCAGCACCCT CGGCTCCTAG TGTTGACGTG TATGGGTCGA ACAATCTGCA ATTTTCGAAA
ATTGAACTCG CGATGGAAAC CACCGCAGGT TACAACCAAA TGGTCAAATA CCATGAGGAA
GCACCGATCA CGCTCAAGTT TAATCAATGG AGTGGTGTGA CAGGAAATAC CTACAAGATC
TATTTTGATG GGGTTGAAGT TGCCACCGGT CCAATCAGTG GTAGCCAAAC TACCGCCCAG
TTTACTTATC CTAAGGGTGG CGTTTATCAA TTGGTGATTG AAGCGTGTGA TGCCACTGGT
TGTACTAAGA GTGCACCAAG CGAAATCACT ATTGCGGATA CTGATGGTTC ACACCTCAAG
CCATTGAAAA TGAACGTTGA CCCTAACAAT AAGTCTTACA CCATCCCACA AAATACGGTG
GTTGGGACTT ATTTTGTTGA GTGGAGTATT TATGATCGTA AGTTTACGGT GGATAACATC
CCAGGGCAGA ACCTAACGCA TATTTTGTAT GGTTTTATTC CGATCTGTGG TCCAAATGAA
TCTCTGAAAT CGGTTGGCGG TAACAGTTTT AACGCTCTGC AAACTGCGTG TAAAGGTGTG
CCAGATTTTG AAGTGGTCAT TCACGATCCA TGGGCTGCTT ATCAAAAGAG TTTCCCTCAA
GCGGGTCATC AGTACAGTTC ACCGATCAAA GGTAACTACG CCATGTTGAT GGCGCTGAAA
AAAACGTATC CTGATCTGAA AATCATCCCA TCGATCGGTG GCTGGACACT CTCTGATCCC
TTCTTCAGCT TTACCGATAA AGCGAAGCGC GATGTGTTTG TCGCTTCTGT GAAACGTTTC
CTGAAAACAT GGAAATTCTA CGATGGCGTG GATATTGACT GGGAATACCC GGGCGGCGGC
GGTCAAGCGG CTGATCTTGG CGATCCGGTA AAAGATGGCC CAGCTTACGT AGCCTTGATG
GCAGAGCTGC GCGCTATGCT TGATGAGCTT GAAGCGGAAA CGGGTCGTAA GTATGAACTG
ACGTCGGCTA TCGGTGTTGG TCATGACAAG ATTGAAGATG TGAACTATGG CCAAGCCGTT
CAGTACATGG ATTATATCTT CGCAATGACT TATGACTTCT ACGGCGGCTG GAATAACGTA
CTGGGCCACC AAACGGCGCT GTACTGTGGT TCATTTATGC GCCCTGGCCA ATGTGACGGT
AAAGGCGTGG ATGAAAATGG CGAGCCGTAC AAAGGCCCAG CTTACACGAC CGATAACGGT
ATTCAACTGC TGCTCGCCCA AGGTGTTCCA CCGAGCAAGC TGGTAGTGGG TGCGGCTATG
TATGGCCGTG GTTGGGAAGG TGTGACTCCG GCTTCACTGA AAGATCCTAA CGACCCAATG
ACCGGCGTTG GTAATGGCAA GTTGAAAGGC ACGACAGCAC AAGGTGTTTG GGAAGCGGGT
GTCATTGACT ATAAAGGCGT TAAAAACTTC ATGCTGGGTG CCAATAAAAC TGGCGTGAAT
GGTTTTGAAT ATGGCTACGA TGAGCAAGCG GAAGCACCTT GGGTTTGGAA CCGTACTACA
GGTCAGCTCG TCACTTTTGA TGATGATCGC TCTGTGAAAG CAAAAGGGGC TTACGTACGT
AACCTTGGCT TAGCGGGTCT GTTCTCATGG GAAATCGATG CAGACAATGG TGACATCCTG
AATGCAATGC ATGAAGGTTT AGCGGGTGGC ACAACGACAC CGCCAGTAAA CAAAGCACCG
GTTGCGAATG CTGGAGCGGA CATCACGGTT ACGGGGCCAG CCGCCGTATC TTTGGATGGC
AGCGCTTCAA AAGACAGTGA TGGAAGTATT GCAAGTTACT TGTGGGAGCA AACCGCAGGT
CCTGCTGTGA CCTTGACAGG GGCAAACAGT GCTAAAGCGA GTTTTAACGC TGCAGAAGTG
ACTGAGAAGC AGACGCTTAC TTTCAAACTG ACCGTGAAAG ATAACAAAGG CGCTACGGCA
ATCGATACTG TGGTGGTCAC CGTCAATCCG AAGTCCACCA CACCTGTGAA CACGGCACCT
GTTGCGGCAG TTTCTGCTCC TGCATCAGTC AAAGCCGGAG CAACAGTGGT GGTCGATGCT
TCCGCGTCGA GTGATGCTGA CCAAGATCCG CTGAGTTTTA CTTGGGATCT GCCTGTCGGC
ATTAACGCCA CCGTGCAAGG AGCCAAAGTG ACGTTTGTCG CCGGTGAGTA TAGCCAAGAC
ACCAGCTTAA GCTTCACTGT GACAGTCAGT GATGGTAAAG CGACCAGCAC AGCCTCTGCT
TCAGTATTGG TTGAGAAAAA AGTTGGCGGT GGTGATGCGT GTACTAACTT GTGGAATGCC
GATGCCATTT ATACTGGTGG TCAGCAAGTG ACTTGGGCAG GCAAGACGTG GGAAGCCAAA
TGGTGGACCC GCGGAGAAGA TCCAAGTAAG TCAGGACAGT GGGGTGTATG GAAAGACCTC
GGTGCCGCGA GTTGTTCTAC TCATTAA
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| Protein sequence | MNRMTLCAAS IACALASTAM AAPSAPSVDV YGSNNLQFSK IELAMETTAG YNQMVKYHEE
APITLKFNQW SGVTGNTYKI YFDGVEVATG PISGSQTTAQ FTYPKGGVYQ LVIEACDATG
CTKSAPSEIT IADTDGSHLK PLKMNVDPNN KSYTIPQNTV VGTYFVEWSI YDRKFTVDNI
PGQNLTHILY GFIPICGPNE SLKSVGGNSF NALQTACKGV PDFEVVIHDP WAAYQKSFPQ
AGHQYSSPIK GNYAMLMALK KTYPDLKIIP SIGGWTLSDP FFSFTDKAKR DVFVASVKRF
LKTWKFYDGV DIDWEYPGGG GQAADLGDPV KDGPAYVALM AELRAMLDEL EAETGRKYEL
TSAIGVGHDK IEDVNYGQAV QYMDYIFAMT YDFYGGWNNV LGHQTALYCG SFMRPGQCDG
KGVDENGEPY KGPAYTTDNG IQLLLAQGVP PSKLVVGAAM YGRGWEGVTP ASLKDPNDPM
TGVGNGKLKG TTAQGVWEAG VIDYKGVKNF MLGANKTGVN GFEYGYDEQA EAPWVWNRTT
GQLVTFDDDR SVKAKGAYVR NLGLAGLFSW EIDADNGDIL NAMHEGLAGG TTTPPVNKAP
VANAGADITV TGPAAVSLDG SASKDSDGSI ASYLWEQTAG PAVTLTGANS AKASFNAAEV
TEKQTLTFKL TVKDNKGATA IDTVVVTVNP KSTTPVNTAP VAAVSAPASV KAGATVVVDA
SASSDADQDP LSFTWDLPVG INATVQGAKV TFVAGEYSQD TSLSFTVTVS DGKATSTASA
SVLVEKKVGG GDACTNLWNA DAIYTGGQQV TWAGKTWEAK WWTRGEDPSK SGQWGVWKDL
GAASCSTH
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