Gene VC0395_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0102 
Symbol 
ID5133971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp112841 
End bp113401 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID640530425 
Producthypothetical protein 
Protein accessionYP_001214943 
Protein GI147671725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAT CTCTGGCACT CTTCATTCTT GCTAGCCTTC CGGTTATGGC CAACGACTAC 
CAAGCCGAGC TCACTCAATA CGTTCAAACT GAATTAAAGC AAATCTCTGC CGATCCGCTG 
ATTATCGAAG CAATAAAACT ACAAAATGCG AAAAATGCTA ACCTCACACA AAGTGAAATT 
GACCAATTGG ATAAACAGTG GCGTGCTGAG GTGGGTCAAA GTGACACCCC AATGATCCAG 
TCCGTATTGA ATACGCCAGC CTCACAAAAG CTGATGGAGA TTCAAAACGC CAGTAACGGC 
AAGATTACCG AAGTATTTGT AATGGATAAT AAAGGCCTGA ATGTTGCGCA GAGCGAAGTC 
ACCTCTGACT ATTGGCAGGG TGATGAAGCC AAATGGCAAA ACACCTACTC AAAAGGCGTT 
GGAGCATTTG ATATCAGTGA CATTGAAGAG GATGAATCCA CACAGGTATT TCAAGCTCAA 
GTGAGTTATA CCGTGGTAGA TCCCAGTTCA GGCGAAGCTA TTGGTGCTAT CACAGTCGGC 
ATTAATGTTG ACGCATTGTA A
 
Protein sequence
MHKSLALFIL ASLPVMANDY QAELTQYVQT ELKQISADPL IIEAIKLQNA KNANLTQSEI 
DQLDKQWRAE VGQSDTPMIQ SVLNTPASQK LMEIQNASNG KITEVFVMDN KGLNVAQSEV 
TSDYWQGDEA KWQNTYSKGV GAFDISDIEE DESTQVFQAQ VSYTVVDPSS GEAIGAITVG 
INVDAL