| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0096 |
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| Symbol | |
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| ID | 5134645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 106026 |
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| End bp | 106607 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530419 |
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| Product | SCO1/SenC family protein |
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| Protein accession | YP_001214937 |
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| Protein GI | 147672521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000000173101 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAGA ATTGGTCATT GATATTAGTG GTGGCGTTTA CCCTAGGATT TAGTATCAAA
GCCTATTTGG ATAGCCAACA GAAATTAGCC GCACAGGTGA CTACCCCACT GACCTTATCG
GGAGACAATC AGCAAGCTGT CGCCATTTTC GATCAAGCCG ACCCACGAAT TCGAATTGTC
TATTTTGGCT TTACACGTTG TCCAGATGTC TGCCCAACCT CTTTAGCTAT GCTCTCCGCA
GCCTTAAACC AAGTCGATGA TAAAACGAAA GCGCAGTTAC GCCCTATGTT TATCTCCCTT
GATCCGGAGC GAGATGATGC CAAACTCGCC GCACAATACG CCCACTACTT TCATCCAATG
ATCGAAGGTT TGTCTGGCTC CGTTGCAACC ACCAACCAGA TTGCGCAAAA GTACGGTGTG
ATTTTTCGTA AAACCGAATT ACCCAATTCG GAGCTGAAAT ACACCTTAGA TCACAGCTCT
TATTTCTATT TCTTGCAGCC GGATGGCACC TTGATCAATA AAGTGCCGCA TACCCAAGAC
CCCACACCCA TCGTGGATGC CATAAAGAAA GTCATTCAAT AA
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| Protein sequence | MSKNWSLILV VAFTLGFSIK AYLDSQQKLA AQVTTPLTLS GDNQQAVAIF DQADPRIRIV
YFGFTRCPDV CPTSLAMLSA ALNQVDDKTK AQLRPMFISL DPERDDAKLA AQYAHYFHPM
IEGLSGSVAT TNQIAQKYGV IFRKTELPNS ELKYTLDHSS YFYFLQPDGT LINKVPHTQD
PTPIVDAIKK VIQ
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