| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0026 |
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| Symbol | |
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| ID | 5134786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 29143 |
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| End bp | 30630 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530349 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214867 |
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| Protein GI | 147671976 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.498715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCAG TGACATTACC TTCGTTGACC CTATTAGTCA CCAATGCTCA GCACTTAGAG
TCTGGCTTGT CCGCTCAGCA TACGTGGACC TCGTCAGGTG GGGTGATCGG CTCATCGCCG
AATGCGCAGT GGCGTTTGGT CGATGCGCAA GGCAGTGTAA AACCCATGCA CTGTGAAGTG
ATGATGGTAG ACGGGGCGTA TTGTTTAAAA GACAGCTGCG GCAGCACGTA TGTCAACGGG
GCAGACATGC CACTGGGCGT TGGGCAAATG GCACGTCTGA CTCACAAAGA TGAAGTGAGT
GTGGGGCCTT ACCGTTTGCG AGTGCTGTTT GGTAACGCCA TCGAAGTGGA AGAACAATAT
GGATCTTTAG ATGCGCTGTT TGCCTCTAAG GATGAGGATC TGCTAGCGGA TTTGACGCTC
GACATCGAAC CAGAAAAACA CGAATTACCA ACCAATACAG ACCCATTACA GGCGCTCGAT
AACCTGATGG GTGCGGCGGG CAGTTCGACC TCCTTACTGG ATGATCCTAA AAGTGAGCAG
CCGTTATCCG CCCAACCTAG CCTCGTGCCA CAAGATAACT TAGTGCTGCA AAATGCCGAT
TTTACGCCAC AAGCGGACAG TGAGTATGAG ATGACCTCAT CGATCCGCCT TAAGAAAATT
CTTGGTTTTG CGAAGGCCAC CTTTGCTAAG CAAACCAAAT CAGAAGCACC GAACGTGACT
TCTGCCACCC CCACAATTTC TCAATATAAA ACCAGCGAAA GCAACGTATC AGAGGGCTTC
ACAATGGATG AAAAAGTACT GGATTTGTTA GAAGAGGAAG TCGCGAAAAG TTTCCAACCG
CAGTTGGAGA AAAGCGCGTA TTCCACTATG CACACAAGCT CAACCAGCCA AGCTAACCAC
TTGGTGACAG GTCCGATCTT GGAAGGGCTC GGCGTAGACC TGAGTGATGA AAATGATATG
AATCGTATGC ATCTTTTATC GCAAGAGCTG GGTGAGTCTT TGCAAGCTTG TGTGCGCGGT
TTACTCGATT TGCATCAACA AGTGAGTGAA AGCCGTTTCG GTACTTTGAA CCGTAATCTG
CAACCCATTG AAGATAACCC GCTGCGTTTA GGCCTCTCCT ATGAAAAGAC GATCCGCACT
CTGTACGATG CTGATAAGAG CGTCGTGCAC CTTTCTGCCC CTGCGGCGAT TGCTGAAAGC
CTAAAAACCG TTCGCGATCA TAATGAAGCG ATGCAGTTCG CCACGTCAGA AGCCTTGAGC
CAAATTCTCA ACGCTTTCTC ACCACAGGTG ATGCTGCGCC GTTTCCACCA CTACAAGCGC
AATTCTGATA CCACACAAAC TTCCACGGAT GCTTGGGCGT GGAATATGTA CTGCAGCTAC
TACCAAGAGC TGACCTCTAA CCGCCAACGC GGCTTTGAGA AGTTGTTTTG GGAGATCTTT
GAGCAAGCCT ACGATCGCAA AATTCGCGAG AAGCAACTGG AGCTATAA
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| Protein sequence | MNSVTLPSLT LLVTNAQHLE SGLSAQHTWT SSGGVIGSSP NAQWRLVDAQ GSVKPMHCEV
MMVDGAYCLK DSCGSTYVNG ADMPLGVGQM ARLTHKDEVS VGPYRLRVLF GNAIEVEEQY
GSLDALFASK DEDLLADLTL DIEPEKHELP TNTDPLQALD NLMGAAGSST SLLDDPKSEQ
PLSAQPSLVP QDNLVLQNAD FTPQADSEYE MTSSIRLKKI LGFAKATFAK QTKSEAPNVT
SATPTISQYK TSESNVSEGF TMDEKVLDLL EEEVAKSFQP QLEKSAYSTM HTSSTSQANH
LVTGPILEGL GVDLSDENDM NRMHLLSQEL GESLQACVRG LLDLHQQVSE SRFGTLNRNL
QPIEDNPLRL GLSYEKTIRT LYDADKSVVH LSAPAAIAES LKTVRDHNEA MQFATSEALS
QILNAFSPQV MLRRFHHYKR NSDTTQTSTD AWAWNMYCSY YQELTSNRQR GFEKLFWEIF
EQAYDRKIRE KQLEL
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