Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1373 |
Symbol | |
ID | 5131621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1328198 |
End bp | 1328971 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640530309 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001214828 |
Protein GI | 147670010 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTACA CCGAAGAAAC AAACAGCCTA ACTTTTCTGG GTACCGGCGG TGCCAGATTT ATGGTCAGCC GCCAGATACT GGCTTCGGGC GGAATCTGGC TAAACCTTGA CGGCAAGCGT TTCCTGATTG ACCCCGGTCC GGGCAGTATT GTGCAGGTAT GCCGCTTGGG CTTAGACCCG GAAAAACTGA GTGCTATTCT TTTGTCTCAC CGCCACCTTG ACCACTCCGG TGATGTGAAT GTAATGATAG AAGCCATGAC CCAGGGAGGG TTTAAGAAAC ACGGCCATTT TCTGGCCCCT AAAGACGCGT TTGATAATGA GCCGGTTATA TACTCTTATC TGAAGCCGTT TTTAAATGAC CTGACCATGC TTGAAGAAGG CCGTGAATAC AATCTGGACG GGATAAAGGT TTTCACCACC CGGCGTCATC AGCACCCGGT GGAAACCTAC GGATTTATCT TTGAATCTTC CAGCCACCGC ATAGGTTACG TAAGCGATAC CCGTTATTTT GAGGAGATGC CGCAGGTTTA CGCAGGTTGC GATGTTCTGA TAATAAACGT AGTCCTGAAG GAAGCTATAG AACGTATTTA TCATTTGAGC ATACCGGATG CCGCCAAACT TATTACCGGG GCTAAACCCA AAACGGCTAT ACTTACCCAC TTTGGTCTGC AGCTTTACCG GGCAGACCCG GCTAAAATGG CGGCACAGCT GGCAAGTGAA ACCGGCATAC CCGTCATAGC CGCCGGCGAT GACCTGCTTT TCAAGCTGGA ATAA
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Protein sequence | MNYTEETNSL TFLGTGGARF MVSRQILASG GIWLNLDGKR FLIDPGPGSI VQVCRLGLDP EKLSAILLSH RHLDHSGDVN VMIEAMTQGG FKKHGHFLAP KDAFDNEPVI YSYLKPFLND LTMLEEGREY NLDGIKVFTT RRHQHPVETY GFIFESSSHR IGYVSDTRYF EEMPQVYAGC DVLIINVVLK EAIERIYHLS IPDAAKLITG AKPKTAILTH FGLQLYRADP AKMAAQLASE TGIPVIAAGD DLLFKLE
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