Gene DehaBAV1_1330 details

Gene Information

• Locus tag: DehaBAV1_1330
• ID: 5131414
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 1294752
• End bp: 1295393
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640530264
• Product: 3-Cys thioredoxin peroxidase
• Protein accession: YP_001214785
• Protein GI: 147669967
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00995589
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAG TAGCCCGCGC CATGCCCCGT ATCGGGGATA TCGCACCTCA GTTTGAAGCT 
TTGACCACTC ATGGTGTTTT GAAACTGGAA GATTTCAAAG GCCAGTGGCT CATTATCTTT 
TCCCATCCCG CAGATTTTAC TCCCGTCTGC ACCACTGAAT TTATTGCCTT CACTGAAATT 
TACCCTGAAC TGCAAAAGAG GGGAGTGGAA TTGCTGGGCT TAAGTGTAGA CAGCAATTCG 
TCCCATATTG CCTGGGTAAG AAATGTTGAA GATAAAACCG GAATAAAGAT ACCCTTCCCC 
ATTATTGCCG ACCTTAATAA AGAGGTTTCC TCTGCCTATG GCATGCTTCA CCCCGGACAG 
AGCAAAACCG AAACTGTCCG GTGCGTGTTT ATACTTGACC CCGGTCAGAA AATACGCCTC 
ATCATGTACT ACCCCATGAA CGTAGGGCGG AATATGCAGG AGATTTTACG GGTAATTGAC 
GCCCTCCAGA CCGCTGACGA GTATAAAGTA GCCCTGCCGG CTAACTGGCA TCCCGGTGAC 
AAAGTAGTAG TGCCTTCTCC ATCTACCCAG GAAATGGCCG AAGAAAGAAT GGGGCAGGGT 
TATGAATGTG TAGACTGGTA TTTGTGCAAG AAACAGCTTT AG 

 

Protein sequence

MEEVARAMPR IGDIAPQFEA LTTHGVLKLE DFKGQWLIIF SHPADFTPVC TTEFIAFTEI 
YPELQKRGVE LLGLSVDSNS SHIAWVRNVE DKTGIKIPFP IIADLNKEVS SAYGMLHPGQ 
SKTETVRCVF ILDPGQKIRL IMYYPMNVGR NMQEILRVID ALQTADEYKV ALPANWHPGD 
KVVVPSPSTQ EMAEERMGQG YECVDWYLCK KQL