| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1329 |
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| Symbol | |
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| ID | 5131445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1293316 |
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| End bp | 1294302 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530263 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001214784 |
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| Protein GI | 147669966 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0225726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGTAC TTGTAGTAGG CGGAACCGGC TTTCTGGGGT ATCATGCCGT ACTGGAACTG
GTACGCCGGG GGCATCAGGT GTCTGTAATA GCTTTGCCGC CCATGCCGTC AGACCATATA
TTCCCCCCAT CGGTAGAGGT ATTTCTTTCA AATATCCACA ATCTTAATCA CGGTATGTTG
CTGTCCATGC TCAAAGGTCA GGACGCAGTG GTGTATGCCG CCGGTGCAGA TGACCGGGTA
GTTCCCAAAG CTCCGGCTTA TCTTTATTTC CACAAGGCCA ATGTTGAAGA CTGTCTCCAC
TTCTTTTCTA TTGCCAAAGA GGCCGGGGTA AAGAGGGGCG TTTTCTTGGG TTCATATTTC
TGCCATTTTG CCAAACTTTG GCCGGAATTG CACCTTGCCG AACACCACCC GTATATTGAA
AGCCGCCTTG AGCAGGAAGA AGCCCTTTTC AAGCTGGGCG GGAACGAAAT GGCTATCTGC
GGTTTGCGTC TGCCTTATAT ATTCGGGAGT ATGCCCGGCC GCACCCCTAT CTGGGAACCC
CTGATAAAGT ACCTTAATTC CGGCTGGTGG CTTTTTTACC CCCGCGGCGG CACAAACTGT
GTCTCGGCGG TAAGGGTGGG CGAGGCTATC GCCGGAGCGG TGGAAAAAGG GCAGGCGGGG
CATAGCTATC TGGTGGGTGA CGAAAACCTC AGCTGGGACG CATTGCTTTC CAAGTTTGGG
GTAATTCTGG GCAAACCTAA AAAGGTTCTT CATTTGCCGG CTTTTATCCT GCGTCTGGCT
GCTTTAGGTC TTAAAAGCAT TCATCGTTTA CAGGGACGGG AATCAGGGCT GGACCCTTTT
AGCTATATCA TCTTGCAGAC ACGTAACACC TTCTTTGACC CTATCCTGTC GCGTAAGGCT
TTAGGTTACG GGCAGGGCGG GCTGGATACA GCCCTGAAAG ATACGGTAGA CGCTTGTCTG
GAAATCCCCC GCAAAGAAGC CGGGTAA
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| Protein sequence | MRVLVVGGTG FLGYHAVLEL VRRGHQVSVI ALPPMPSDHI FPPSVEVFLS NIHNLNHGML
LSMLKGQDAV VYAAGADDRV VPKAPAYLYF HKANVEDCLH FFSIAKEAGV KRGVFLGSYF
CHFAKLWPEL HLAEHHPYIE SRLEQEEALF KLGGNEMAIC GLRLPYIFGS MPGRTPIWEP
LIKYLNSGWW LFYPRGGTNC VSAVRVGEAI AGAVEKGQAG HSYLVGDENL SWDALLSKFG
VILGKPKKVL HLPAFILRLA ALGLKSIHRL QGRESGLDPF SYIILQTRNT FFDPILSRKA
LGYGQGGLDT ALKDTVDACL EIPRKEAG
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