Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1175 |
Symbol | |
ID | 5131966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1152266 |
End bp | 1152766 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640530100 |
Product | RDD domain-containing protein |
Protein accession | YP_001214632 |
Protein GI | 147669814 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCACT TGAAAAGCCC TTTGGCTCTG GAATTTGCCG GCTTCTGGCG GCGTTTCGGA GCATTTATCA TAGATAATAT AATCATCAGC ATAATCTCTT CAGCCTTTGT ACCTGTACAC TGGTTTGAAA TACCTGTTTT CTGGAACATA GACAGTCTGT CAGGTATTTG GTGGCTGGCA GCCCCGATTA TAGCTTTTTC AAACGTACTT TCATTATTAG CCATGGTGGC TTACTTTGTA TTTTTCTGGT ACTGGCGCGG TCAAACCCCC GGCATGATGA TTGCCCAGAT AAAGGTTATC AGGGTAGATG GTTCAGGGGT TTCTTTAGGA AACTCCATTA TCCGTTTTCT AGGGCTTATT GTATCAACCT TACCTTTAGG TCTGGGGTTT TTCTGGATTG CCTGTGACCG CCGCAAACAG GGCTGGCATG ATAAAATGGC TGATACAGTA GTAGTCAAAC TACCCAAACC GCCTGAGGTT ACCGCTCCTC AGGCTACTTG A
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Protein sequence | MIHLKSPLAL EFAGFWRRFG AFIIDNIIIS IISSAFVPVH WFEIPVFWNI DSLSGIWWLA APIIAFSNVL SLLAMVAYFV FFWYWRGQTP GMMIAQIKVI RVDGSGVSLG NSIIRFLGLI VSTLPLGLGF FWIACDRRKQ GWHDKMADTV VVKLPKPPEV TAPQAT
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