| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1100 |
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| Symbol | rph |
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| ID | 5131970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1091413 |
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| End bp | 1092138 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530025 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001214558 |
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| Protein GI | 147669740 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAGAG GTGATGGCCG CAACTTTAAC CAGCTAAGGC CGATAACAAT TACACCCGGT
TTCCAGAGCT TTGCCGAGGG TTCGGTTTTG ATAGAGCAGG GTAAGACAAG GGTAATCTGT
TCGGTCAGTA TGGAAGACAG AGTTCCCCAG TTTTTGCGTA ATAGCGGTAC AGGCTGGGTC
ACGGCTGAAT ATTCCATGTT GCCCCGTTCC ACGGTTACCC GTACCCAAAG AGATTCGTCT
GCAGGCAAGA TATCCGGCAG GAGTCAGGAA ATACAGCGCC TTATAGGCCG CTCCCTGCGT
TCCTGTGTAG ATATGGCGGC TCTGGGCGAG AGGTCTTTTA TTGTAGACTG TGACGTTATT
CAGGCAGATG CCGGCACCCG CACCGCTTCC ATAACCGGTT CTTATATAGC CCTGTATCTG
GCGTTTAAAA AAATGGTAGA TATGGGTATT CTTTCCAAAA TGCCCTTTAC TTCTCAGGTA
GCGGCGGTCA GTGTCAGTAT TTTTAAAGGC AATATTGTGC TTGACCCCTG TTATGACGAA
GATTTTCAGG CTGAAGTGGA TTTTAATCTG GTCATGAATG ACCGGGGTGA GTTTGTGGAA
ATACAGGGTA CGGCTGAAGG CAAGGCCTTC TCCCGTGATA CCCTTGATCA GGTACTCAAA
CTGGGCGAAG CCGGTATCAG ACAGCTTTTT GATATTCAGA AGGGTATTAC CCAGCCTCAG
CTTTAG
|
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| Protein sequence | MQRGDGRNFN QLRPITITPG FQSFAEGSVL IEQGKTRVIC SVSMEDRVPQ FLRNSGTGWV
TAEYSMLPRS TVTRTQRDSS AGKISGRSQE IQRLIGRSLR SCVDMAALGE RSFIVDCDVI
QADAGTRTAS ITGSYIALYL AFKKMVDMGI LSKMPFTSQV AAVSVSIFKG NIVLDPCYDE
DFQAEVDFNL VMNDRGEFVE IQGTAEGKAF SRDTLDQVLK LGEAGIRQLF DIQKGITQPQ
L
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