Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1050 |
Symbol | |
ID | 5131499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1046008 |
End bp | 1046976 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640529975 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001214508 |
Protein GI | 147669690 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.173196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTC AGCTAAAAGA AAATAACCTG GATACAGGTG AGGTACTAAT CCATTATCTG GCTGGACCGG ATAATGGGCC TCCGCTTGTT CTCATACCCG GCCAGGGGCT TTCGCTGGAA AGTTACCAAA GAGTAATGAC ACCCTTGGCA AAGAACTTTC AGGTTTTTGC AGTAGACGTG CGCGGTCACG GAAAATCAGG CTGGACAACC GGCAAATACA ATTTCCCGAA TATGGGAAAT GATTTTAAGA TTTTTCTGGA ACAAGTTGTC AGACGGCCGG CAATAATCTC CGGCAATTCC TCAGGCGGCC TGATAGCCCT GTGGTTGGCG GCAAATGTCC CTGAACTGGT TAGCGGTATT ATTCTGGAAG ACACTCCTGT ATTCAGTGCA GAATGGCCTC GGCTCAGAGA TGATTGCTGG GTATACCGCA TTTTCAAACG CAATGCCGAA ACTATCGGTT CCGCTGAAGG CCGAAATCTG GCTGCATTTT TCAAGGGCAT GGAAGTGCCA ATTGAAGGCA AACAGAGAGT TATTCAGTTT CCTGTCTGGC TTACAGGAGC AATGGCCGGA ATGGTAAGAC TGCACCAGTG GCTGAAACCA GGCAAGCCGG TAGACCTAGC TCTGCTTCCA GCTGAAACAC GCATGCTGAT AAAGGGGCTT TCGCAATATG ACCCTGATTT TACCAAAGCA TTTGTTGACG GCCGGGCATG CGAAGCCTTT GACCATGCGG AAGCTTTAAA AAAAGTAAAA TGCCCGGTGT TTGTTCTGCA GGCCAATTGG TTCAGACACC CTGATTTCGG GCTGGTGGAG GCAATGGATA ACCAAGATAT AAATCATCTG CTCGCACTCA CCCCTCAAGC CCAATTTGCC AGAATAACTT CAGGCCATAT GATTCATTTT GAACAGCCTC CAGAATATTT AAAACACTTG AACGCATTTG CTGCCGGCAT ATATTCAAAT CCGAAGTAA
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Protein sequence | MKLQLKENNL DTGEVLIHYL AGPDNGPPLV LIPGQGLSLE SYQRVMTPLA KNFQVFAVDV RGHGKSGWTT GKYNFPNMGN DFKIFLEQVV RRPAIISGNS SGGLIALWLA ANVPELVSGI ILEDTPVFSA EWPRLRDDCW VYRIFKRNAE TIGSAEGRNL AAFFKGMEVP IEGKQRVIQF PVWLTGAMAG MVRLHQWLKP GKPVDLALLP AETRMLIKGL SQYDPDFTKA FVDGRACEAF DHAEALKKVK CPVFVLQANW FRHPDFGLVE AMDNQDINHL LALTPQAQFA RITSGHMIHF EQPPEYLKHL NAFAAGIYSN PK
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