Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0888 |
Symbol | |
ID | 5131752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 873655 |
End bp | 874857 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529806 |
Product | elongation factor Tu |
Protein accession | YP_001214348 |
Protein GI | 147669530 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000621917 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGC AAAAGTTTGA CCGCTCTAAG CCTCATTGTA ATGTAGGCAC TATCGGACAC GTAGACCATG GCAAAACTAC CCTGACTGCG GCTATCACCA AGACCCTTTC AACCAAGGGT TGGGCTGATT TCCGCGCCTA TGACCAGATT GACAATGCTC CTGAGGAAAA AGCTAGAGGT CTGACAATTG CTATTTCTCA TATTGAATAT CAGACCGAAA CCAGGCATTA TGCCCATATT GACTGTCCTG GACATGCCGA TTATATCAAG AACATGATTA CCGGTGCCGC CCAGATGGAC GGTGCTATTC TGGTAGTTTC CGCGCCTGAC GGCCCTATGC CTCAGACCCG CGAACATGTA CTGCTGATTC ATCAGGTAGA AGTACCTGCT GTAGTAGTAG CCCTTAACAA ATGCGATATG ATGGATGACG AAGAACTGCT TGAGCTGGTT GAGCTTGAGG TTCGTGAACT TCTCACCAAA AATTCTTTCC CCGGTGACGA AATCCCGGTA GTTCGGGTAA GTGCCATTAA AGCCCTTGAG TGCGGCTGTG GCAAACGCGA ATGTGAATGG TGTGGTAGAA TCTGGAAGCT GATGGATGCT GTTGATACTT ACATTCCCAT TCCTCCCCGC CCCGTTGACA AGCCGTTCTT GATGAAGGTT GAAGATGTCT TCAGCATCAA GGGTCGCGGT ACTGTTGCTA CCGGCCGTGT TGAACGCGGT GTTATCAAAG GCGGCGATGA AGTTGACCTG GTCGGTCTGC ATCATGAGCC CCGCAAGATT GTTGTTACCA GTTTGGAAAT GTTCCATAAG ATTCTTGACA CTGCTGAACC TGGCGATGCT GTCGGGTTGC TTCTCCGTGG TGTTGAGCGT GAAGATATCG AGCGTGGTAT GGTACTTGCC AAACCCGGCT CCATCAAACC TCATGTTAAT GCCGAAGCTG AAGTTTATGT ACTCAGCAAG GACGAAGGTG GTCGCCATAC TCCTTTCTTC AATGGCTACA AACCCCAGTT CTTCTTTGGT ACTACTGATG TTACCGGTGA GATTCATCTC CCCGAAGGCG TTGAAATGGT TGTGCCCGGT GACCATGTAA AGATGAAGAT ATCTACTATC TATCCGGTAG CTATGGAAAA GGGTATGCGT TTTGCCATCC GTGAAGGCGG TAAGACCGTT GGTGCGGGTG CCATCTCTCA GGTATTAGCG TAA
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Protein sequence | MAKQKFDRSK PHCNVGTIGH VDHGKTTLTA AITKTLSTKG WADFRAYDQI DNAPEEKARG LTIAISHIEY QTETRHYAHI DCPGHADYIK NMITGAAQMD GAILVVSAPD GPMPQTREHV LLIHQVEVPA VVVALNKCDM MDDEELLELV ELEVRELLTK NSFPGDEIPV VRVSAIKALE CGCGKRECEW CGRIWKLMDA VDTYIPIPPR PVDKPFLMKV EDVFSIKGRG TVATGRVERG VIKGGDEVDL VGLHHEPRKI VVTSLEMFHK ILDTAEPGDA VGLLLRGVER EDIERGMVLA KPGSIKPHVN AEAEVYVLSK DEGGRHTPFF NGYKPQFFFG TTDVTGEIHL PEGVEMVVPG DHVKMKISTI YPVAMEKGMR FAIREGGKTV GAGAISQVLA
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