Gene DehaBAV1_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0888 
Symbol 
ID5131752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp873655 
End bp874857 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content49% 
IMG OID640529806 
Productelongation factor Tu 
Protein accessionYP_001214348 
Protein GI147669530 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000621917 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGC AAAAGTTTGA CCGCTCTAAG CCTCATTGTA ATGTAGGCAC TATCGGACAC 
GTAGACCATG GCAAAACTAC CCTGACTGCG GCTATCACCA AGACCCTTTC AACCAAGGGT
TGGGCTGATT TCCGCGCCTA TGACCAGATT GACAATGCTC CTGAGGAAAA AGCTAGAGGT
CTGACAATTG CTATTTCTCA TATTGAATAT CAGACCGAAA CCAGGCATTA TGCCCATATT
GACTGTCCTG GACATGCCGA TTATATCAAG AACATGATTA CCGGTGCCGC CCAGATGGAC
GGTGCTATTC TGGTAGTTTC CGCGCCTGAC GGCCCTATGC CTCAGACCCG CGAACATGTA
CTGCTGATTC ATCAGGTAGA AGTACCTGCT GTAGTAGTAG CCCTTAACAA ATGCGATATG
ATGGATGACG AAGAACTGCT TGAGCTGGTT GAGCTTGAGG TTCGTGAACT TCTCACCAAA
AATTCTTTCC CCGGTGACGA AATCCCGGTA GTTCGGGTAA GTGCCATTAA AGCCCTTGAG
TGCGGCTGTG GCAAACGCGA ATGTGAATGG TGTGGTAGAA TCTGGAAGCT GATGGATGCT
GTTGATACTT ACATTCCCAT TCCTCCCCGC CCCGTTGACA AGCCGTTCTT GATGAAGGTT
GAAGATGTCT TCAGCATCAA GGGTCGCGGT ACTGTTGCTA CCGGCCGTGT TGAACGCGGT
GTTATCAAAG GCGGCGATGA AGTTGACCTG GTCGGTCTGC ATCATGAGCC CCGCAAGATT
GTTGTTACCA GTTTGGAAAT GTTCCATAAG ATTCTTGACA CTGCTGAACC TGGCGATGCT
GTCGGGTTGC TTCTCCGTGG TGTTGAGCGT GAAGATATCG AGCGTGGTAT GGTACTTGCC
AAACCCGGCT CCATCAAACC TCATGTTAAT GCCGAAGCTG AAGTTTATGT ACTCAGCAAG
GACGAAGGTG GTCGCCATAC TCCTTTCTTC AATGGCTACA AACCCCAGTT CTTCTTTGGT
ACTACTGATG TTACCGGTGA GATTCATCTC CCCGAAGGCG TTGAAATGGT TGTGCCCGGT
GACCATGTAA AGATGAAGAT ATCTACTATC TATCCGGTAG CTATGGAAAA GGGTATGCGT
TTTGCCATCC GTGAAGGCGG TAAGACCGTT GGTGCGGGTG CCATCTCTCA GGTATTAGCG
TAA
 
Protein sequence
MAKQKFDRSK PHCNVGTIGH VDHGKTTLTA AITKTLSTKG WADFRAYDQI DNAPEEKARG 
LTIAISHIEY QTETRHYAHI DCPGHADYIK NMITGAAQMD GAILVVSAPD GPMPQTREHV
LLIHQVEVPA VVVALNKCDM MDDEELLELV ELEVRELLTK NSFPGDEIPV VRVSAIKALE
CGCGKRECEW CGRIWKLMDA VDTYIPIPPR PVDKPFLMKV EDVFSIKGRG TVATGRVERG
VIKGGDEVDL VGLHHEPRKI VVTSLEMFHK ILDTAEPGDA VGLLLRGVER EDIERGMVLA
KPGSIKPHVN AEAEVYVLSK DEGGRHTPFF NGYKPQFFFG TTDVTGEIHL PEGVEMVVPG
DHVKMKISTI YPVAMEKGMR FAIREGGKTV GAGAISQVLA