| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0480 |
|---|
| Symbol | rplQ |
|---|
| ID | 5131801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 467969 |
|---|
| End bp | 468322 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640529382 |
|---|
| Product | 50S ribosomal protein L17 |
|---|
| Protein accession | YP_001213943 |
|---|
| Protein GI | 147669125 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0203] Ribosomal protein L17 |
|---|
| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000309842 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACA AAGTATCAGG TAGAAGATTT GATAGACCCA CTGGCCAGAG AATGTCGCTT
TACCGCAATC TGGTAACGGA TCTTTTAAAT TATGAGGAGA TTACTATCTC CGAGCCACGG
GCAAAGGAAA TACGGAGCAT GGCTGAAAAG ATGATTACTC TGGGTAAAAA GGGTACTCTG
GCTTCCCGCC GCCGTGCTTT GGCTTTCGTG TATATGCCAG GTATTGTTGA GAAGGTTTTT
GAAGACCTGT CAAAGCGATA TGCTGAGCGT CCGGGTGGTT ATACTCGCAT GACCAAGCTT
GGTCCCCGTC AGGGTGATGG TGCCGAGATG GTTAAACTGG AACTTATCAA GTAG
|
|---|
| Protein sequence | MRHKVSGRRF DRPTGQRMSL YRNLVTDLLN YEEITISEPR AKEIRSMAEK MITLGKKGTL
ASRRRALAFV YMPGIVEKVF EDLSKRYAER PGGYTRMTKL GPRQGDGAEM VKLELIK
|
|---|
| |