| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0460 |
|---|
| Symbol | rpsQ |
|---|
| ID | 5131219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 458142 |
|---|
| End bp | 458414 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640529362 |
|---|
| Product | 30S ribosomal protein S17 |
|---|
| Protein accession | YP_001213923 |
|---|
| Protein GI | 147669105 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0186] Ribosomal protein S17 |
|---|
| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000738553 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAA AAAACAAAAC CCGAATCGGT CATGTGATCA GCGATAAGAT GGAAAAGACC
ATTGTGGTGG GTATTGATGT AGTCAAACGT CATCCCCTTT ACAAAAAGAC TTATCGCCGG
ACTATGAAAT ATCTGGTTCA TGATGAAAAA AACGAAGCTA AAATTGGTGA TATGATTGAA
ATAGTTGAAT GTCGCCCCAT CTCCAAGGGG AAATACTGGC GGCTCAGCAA GATAATCACC
AAGGGCCACA TTGTTGCGGC TCAGGAAGCA TAG
|
|---|
| Protein sequence | MEIKNKTRIG HVISDKMEKT IVVGIDVVKR HPLYKKTYRR TMKYLVHDEK NEAKIGDMIE
IVECRPISKG KYWRLSKIIT KGHIVAAQEA
|
|---|
| |