| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0427 |
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| Symbol | |
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| ID | 5131226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 434657 |
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| End bp | 435736 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640529329 |
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| Product | isocitrate dehydrogenase (NADP) |
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| Protein accession | YP_001213890 |
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| Protein GI | 147669072 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type
[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCATA ATGTAACCCT TATACCCGGT GACGGGATTG GTCCTGAAAT ATCTGAAGCT
ACCCGTCGGG TGCTGGAAGC TACTGGTGTT AAGTTTAACT GGGAAGTGGT AAATGCCGGT
GCGGACGTGG TGGCTGAATA TGGCACACCC TTGCCGGATA TAGTGCTTGA ATCCATCAGG
AAAAATAAGG TTGCCATAAA AGGGCCGGTA ACCACCCCGG TTGGCTCAGG CTTCAGAAGC
GTAAATGTGG GTATGCGTAA AGCCCTTAAT CTGTATACCT GCCTTCGCCC CTGTAAGACC
TATCCCGGTG TTCCCTCCCG TTATGACAAT GTGGATATAG TCATAGTGCG GGAAAACATG
GAAGACCTGT ATGCCGGTAT TGAGTTTGAA AAGGGCAGTG CCGAAGCCCT AAGGCTTATT
GAGTTTATTA AAGAAAATAA AAAGGTGGAA ATACGGACTG ATTCGGGTAT CAGCATAAAA
CCAATCAGTG TGTTTGGTAC CGAACGCATA TTCCGCTGGG CTTTTAAATA TGCCAAAGAT
AACAACCGCA AAAAGGTAAC TGCTGTCCAC AAGGCCAATA TTATGAAGTA TTCAGACGGG
CTGTTTCTGG CTGTAGGCCG CAAAGTGGCG GAGGAATACC CTGAAATAGA GTTTGAAGAC
CGGATTGTAG ACAATATGAC TATGCAGCTG GTTAAAACCC CCACCCAGTT TGATATACTG
GTCTGCCCCA ACCTGTACGG AGACATCTTA TCTGATTTGT GTGCCGGACT GGTGGGTGGT
TTGGGGGTTG CACCGGGTGC CAATATCGGT GATGAATACG CCCTGTTTGA GCCTACCCAT
GGTTCTGCCC CCAAGTACAA GGGGCTGAAC AAGGTAAATC CCATGGCTAT GATGCTTTCA
GGTGTGCTTA TGCTCCGCTA TCTTAAAGAA GAGAAGGCTG CTGACAAGTT GGAAAATGCT
ATTGCGGCGG TTATTGCCGA AGGCAAGAGT GTTACTTACG ATATGCTTTC TCCTGACAAA
CAGGCAGTGG CAGTGGGTAC TTCGCAGGTG GCAGATGCCA TAATAGCCAA AATGAAATAA
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| Protein sequence | MYHNVTLIPG DGIGPEISEA TRRVLEATGV KFNWEVVNAG ADVVAEYGTP LPDIVLESIR
KNKVAIKGPV TTPVGSGFRS VNVGMRKALN LYTCLRPCKT YPGVPSRYDN VDIVIVRENM
EDLYAGIEFE KGSAEALRLI EFIKENKKVE IRTDSGISIK PISVFGTERI FRWAFKYAKD
NNRKKVTAVH KANIMKYSDG LFLAVGRKVA EEYPEIEFED RIVDNMTMQL VKTPTQFDIL
VCPNLYGDIL SDLCAGLVGG LGVAPGANIG DEYALFEPTH GSAPKYKGLN KVNPMAMMLS
GVLMLRYLKE EKAADKLENA IAAVIAEGKS VTYDMLSPDK QAVAVGTSQV ADAIIAKMK
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