Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0341 |
Symbol | |
ID | 5131477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 349113 |
End bp | 349808 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640529241 |
Product | hypothetical protein |
Protein accession | YP_001213805 |
Protein GI | 147668987 |
COG category | [R] General function prediction only |
COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTAG CAAAAGAGCT TTATCAACTG CAAGAACTGG AACTGGATTT GGAGTCTCAC CTGATGCAGG CCTCCAAATT ACAGGCAATC CTGCAGGATG ACTCTGCTCT CAGGCAGGCC GAAAATAATC TGGTGGAAGC GGCCAGCCAT CTGAAAGAAC AGCAGGCTTC TCTGCGTGAA CTTGAAAGTC AGTCTGCTGA TTTGGATGCC AAGATAAACG AAATTAAGAA AAGCCTGTAT TCAGGACGGA TTAATAATCC CAAAGAGCTT TCTAATCTGA GTAAGGAACA GGAAATCCTT GAAGCAAAGC GTACCCAGAT AGATGATCAA GCGCTTGCCG GCATGGACCG TCTGGAAGAG TTGCAGACTA ATTGCAATCA GGTAATGGAG GGACTGGAAA CTGCCCGCTC GGAATGGCAG CAAAACCAGA CCCAAAATAC CCAGTCACTG AACCTGATAC TTTTAGAGAT AGAAAAGCTT AAAAACGAAC GTCATGAGTT TATGTCCTGT TTTGAACAGC CGGATTTGGT ACTTTTCCAG ACTCTGCGTA AAAGCAAGGG CAGGGCTGTT TCAAAGGTAG AACAAGGGAA TTGCCGTGGT TGCGGTTTGA AATTAACAGC GGCTTGGATG CAGCGTGCCA GAGCCGGTAC TCTGGTGCAG TGCAGCGGTT GCCAGCGAAT ATTATATCTG GATTGA
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Protein sequence | MQLAKELYQL QELELDLESH LMQASKLQAI LQDDSALRQA ENNLVEAASH LKEQQASLRE LESQSADLDA KINEIKKSLY SGRINNPKEL SNLSKEQEIL EAKRTQIDDQ ALAGMDRLEE LQTNCNQVME GLETARSEWQ QNQTQNTQSL NLILLEIEKL KNERHEFMSC FEQPDLVLFQ TLRKSKGRAV SKVEQGNCRG CGLKLTAAWM QRARAGTLVQ CSGCQRILYL D
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