| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0317 |
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| Symbol | rplS |
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| ID | 5131464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 326973 |
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| End bp | 327368 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529217 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_001213781 |
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| Protein GI | 147668963 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000173256 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGAGA CTATGAATAA TCAGGAAGCC CCTGAAACCA GTGAAGAAGA AACAGTTGCT
GTAGAAAATA CCAAGGCCGA AAAAGTTTTA CCAAATTTTG GCCCCGGTGA TACTATAAAA
GTACACGCCC GCATTAAAGA AGGCGACAAA GAACGCATTC AGATGTTCCA GGGTGTAGTC
CTGAAGGTCA AACAGGCCGC TGACGGCGGC AATTTCACCG TTCGCCGTAT AAGCTACGGC
GTGGGCGTTG AACGCACCTT CCCCTTCCTC TCACCCAATG TTACCAAGGT TGAGATTATG
AAGAAGGGCC GAGTACGCCG TGCCCGCCTG TTCTACCTGC GCAAGCTTTC TGGAAAAGCA
GCCCGCATTA AAGAAGTTAA ACAGACACCC TCTTAA
|
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| Protein sequence | MEETMNNQEA PETSEEETVA VENTKAEKVL PNFGPGDTIK VHARIKEGDK ERIQMFQGVV
LKVKQAADGG NFTVRRISYG VGVERTFPFL SPNVTKVEIM KKGRVRRARL FYLRKLSGKA
ARIKEVKQTP S
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