Gene DehaBAV1_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0309 
Symbol 
ID5132232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand+ 
Start bp317320 
End bp317943 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content48% 
IMG OID640529209 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001213773 
Protein GI147668955 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTCA TGTTAACCAC GCTGCTTAGT GTTATGGTTA TATCCTTTTC AGGTGTTCTT 
ATGCCCGGTC CCATGTTTGC GTTGACTCTT TCCCGTAGCT ATCATACCCC TTGGGCAGGT 
GCTCAGATTG TGCTTGGGCA TATACTGGTG GAATTGCCTA TTATTCTCCT TATCTATTTT 
GGTTTTGCCG GTTTTTTTGA GCTTATCTGG GTGCAGATAC TGCTCAGTCT GGCCGGTGGA 
GTTATGATTG TTTACATGGG CTTGGGTATG ATAAAAGCCC GGCGTGAAGC CAGCCAGGAT 
AAGGCCTCCT TTAAACACAA TACGGTAGTG TCCGGAGCGG CTATGAGCGC CTTAAATCCC 
TTTTTTCTGG TCTGGTGGGC AACTGTAGGG GCGATGCTGG TTATGAAAGT GTCAGACTAC 
GGTCTGGCGG GGTTGGGGGC TTTGGCTGCC ACTCATTGGC TGGTGGATTT AGCCTGGCTT 
TGTCTTATTT CATTTATTGT TTACCGCACC CATCGTCTGT GGGGGAGCAG GGTGAGGGAG 
TTAGTTTTTA TAGGCTGCGG TTTGTTGCTG GTGGTTTTCG GAGTGTATTT TATCATCTCC 
GGGCTGAAAC TGTGGCTTGC TTAA
 
Protein sequence
MTFMLTTLLS VMVISFSGVL MPGPMFALTL SRSYHTPWAG AQIVLGHILV ELPIILLIYF 
GFAGFFELIW VQILLSLAGG VMIVYMGLGM IKARREASQD KASFKHNTVV SGAAMSALNP 
FFLVWWATVG AMLVMKVSDY GLAGLGALAA THWLVDLAWL CLISFIVYRT HRLWGSRVRE 
LVFIGCGLLL VVFGVYFIIS GLKLWLA