| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0280 |
|---|
| Symbol | |
|---|
| ID | 5132412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 292229 |
|---|
| End bp | 292978 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640529180 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001213745 |
|---|
| Protein GI | 147668927 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCT ACCATCTGAT ATACGAGCCC AGCTATAAGT CAGCGGTATT TCACCACTGG
ACGGAATGCA ATCTGGACTG CAAAGGCTGT TTCTGCCGGG TGGAGAAGCT GGACTTCGGC
TTGTTTCCTG ACGCACTGGA AAGGCTCAAG GACAAAGCCC CTGAAACCGC CCCGACAGAT
TTTCTTGAAA GCCCCGAAGA GGCCCTTAAA CTGCTTGAGG GCTGCGAACT GGAGCGGGCG
GTCTTCATCG GCACCGAACC CGCTTTGGAC CCGGATTTGC CGGCGCTAGC CAAAGCCCTG
CATCAAAAAT ATGGCTCATA CAACGTACTC CTGACCAACG GGGTCAGGCT GTGTGACCTT
TCGGCCATAG ACGAAATCAT CTTCAGCCTC AAAGCGGTAA CGAATGCTAT TTACCAAGAC
TACACCGGAC GCTCCAATGA AAAGACACTG GATAACTTTA AAAAAGTGCA CGCCTCAGGC
AAGAAACTCC AGGCCGAATG CCTCTTGATA CCCGGACTGA TAGAAGCAGA CGAAGTGGAG
AAGATTGCCA AGTTTATAGC CACGGTAGAC AAGGACATCA CCTTAAGGAT AGACGGCTAC
TTTCCCATAC CCGGCTGCCC CTGGCGGGGG GCAACCCCCA AAGAGGTCAC CGAAGCATCC
CAACGGGCCG GGAAACACCT TGCCAAAGTA AATTACCTGT CAGCTGACTT GCCCCGACAG
GGTGAGAAAC CCCTAAGGCT TTTCGGTTGA
|
|---|
| Protein sequence | MKVYHLIYEP SYKSAVFHHW TECNLDCKGC FCRVEKLDFG LFPDALERLK DKAPETAPTD
FLESPEEALK LLEGCELERA VFIGTEPALD PDLPALAKAL HQKYGSYNVL LTNGVRLCDL
SAIDEIIFSL KAVTNAIYQD YTGRSNEKTL DNFKKVHASG KKLQAECLLI PGLIEADEVE
KIAKFIATVD KDITLRIDGY FPIPGCPWRG ATPKEVTEAS QRAGKHLAKV NYLSADLPRQ
GEKPLRLFG
|
|---|
| |