| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0242 |
|---|
| Symbol | |
|---|
| ID | 5131972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 244313 |
|---|
| End bp | 244729 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640529144 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001213709 |
|---|
| Protein GI | 147668891 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATG CCCTGCCCCT GTACCGTCTT GAAATACCCA GCCACAGCCA AACCGAATTT
ATAGATATTA CCCCCCAGAT TCGTTCTGTT ATCCACCAAA GCGGTATTAC CTCCGGCCTG
TGCCTTATTT TTGTCCCTCA CACTACTGCC GGACTGACTA TAAACGAAAA TGCCGACCCT
GACGTTATCA CCGATATCAA AGCCCAGCTT GAACAGATAG TCCCTTCCGT TACTCCCTTC
CTTCACGCCG AAGGCAACTC GGCCGCCCAT GTCAAAACCA GCCTGATGGG AAACAGCCTG
AACCTGATTA TAGAAGAAGG AATGATACTG TTGGGAACAT GGCAGGGTAT TTACCTTGCT
GAATTTGATG GTCCCCGGAA ACGTACAGTG AATATAAAAA TCCTCAAGGA AAAGTAA
|
|---|
| Protein sequence | MTDALPLYRL EIPSHSQTEF IDITPQIRSV IHQSGITSGL CLIFVPHTTA GLTINENADP
DVITDIKAQL EQIVPSVTPF LHAEGNSAAH VKTSLMGNSL NLIIEEGMIL LGTWQGIYLA
EFDGPRKRTV NIKILKEK
|
|---|
| |