Gene DehaBAV1_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0195 
Symbol 
ID5132241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp203508 
End bp204203 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content49% 
IMG OID640529097 
Productphage integrase family protein 
Protein accessionYP_001213663 
Protein GI147668845 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCT ACCTGGAACC GGAAGAGGTG GAACGGCTAG AGCAGTCGGC AGAATATATG 
CGGGATAGGC TGCTTATCCG TTTGCTCTTT CATCTCGGTT GCCGTGTCTC GGAAGCCTTG 
GGGATTAAGG TAAGCGACAT CGATTTCAAA CAGGGCTTAG TGACTATTCA ACACCTCAAG 
CAGCGTATCA AGCTCTCTTG CCCGAAATGC AGCGCTAGAC TGGGAAAAGG TCATAAATTT 
TGCCCGGTGT GCGGGCAGAA GGTGGAGAAA GTGGTTGCTG AGGAAAAAGA ACACAGGAAG 
TTCCGCAATC TACCTTTGGA TACAGTCACA TTGGGGATGC TGAAGGAATA TATCAAGCGC 
GGCGGCGCCA GTTCCAAGAA AGGGAATCAG CAGCTTTTTA ATTTAACCCG CCATCGAGCA 
TGGCAGATAG TGAAAGAGTG CGCTGAGAAA GCTGCATTAC CTGATTTGAT CAATCCGGAA 
AGCGGTAAGG TGCATAATGT CAGCCCGCAT AAACTGCGTG ATGCTTTCGC CGTGCACGCA 
GTCAAGCTGG ATGACTCAGG AGATGGTCTC AGGTTACTTC AAGAGCATCT GGGGCACCAA 
AGTATCACTA CCACTATGAA ATACCGCAAG GTATCGGGTG AAGAACAAAA AGAGTGGTAC 
GAAAAGCTGT GGCAAGGAGG TAAACAGGAT GGGTAA
 
Protein sequence
MKAYLEPEEV ERLEQSAEYM RDRLLIRLLF HLGCRVSEAL GIKVSDIDFK QGLVTIQHLK 
QRIKLSCPKC SARLGKGHKF CPVCGQKVEK VVAEEKEHRK FRNLPLDTVT LGMLKEYIKR 
GGASSKKGNQ QLFNLTRHRA WQIVKECAEK AALPDLINPE SGKVHNVSPH KLRDAFAVHA 
VKLDDSGDGL RLLQEHLGHQ SITTTMKYRK VSGEEQKEWY EKLWQGGKQD G