| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0188 |
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| Symbol | |
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| ID | 5132387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 193972 |
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| End bp | 195231 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640529090 |
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| Product | DNA polymerase III beta subunit family protein |
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| Protein accession | YP_001213656 |
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| Protein GI | 147668838 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATATTG AGGGCAAGCG TTCAGGTGAG GGCTTTTGTG CTCACAAGAC GATACTGGTA
AACGCTCTAT CAAGGGCACT AGCCGAAAGG GTAGTGCTTA TGGATTTCAC GATAGGGCGT
AAAGGCTTTC TTACCTACAT TAAGTCATTA GGCGGGAGTA ACGTTGTAAA AGTCGTTCCC
TCGTCTAACG GCGATGCCAG CGGGTTGCGG GTTGCCGATA AAAGACTGAA GGTGGTCTGC
GGAGCAAATA CCAGTTACCT TGACGATATG GCTTGGGTAG GTGAGAAAAC ACCTCTAACA
CTCTGCGATG TCAGGGTAAG TCCTTCCAAT GCCGTCAAGC CCAACCTCGG AGCACTGGAG
CTATCGGAAG CACTGTCAAG GGTAGTGCCG TTTACCGCTA AAGAGGATAA CAGACCTGTC
TTACAGAGTG TCCTTTTCAA GGTGGCAGAC GGCAAGCTCA CGATGGTAAG CGCCGATGGT
TACAGGCTGG CGATGGTGAA GCTGGATTTT GACGGTGATG AGGGGCAAGT CCTGATAAAC
AGGGATGAGC TAAGGGGTGT AATCAGTGCC CTGCGAAGGG CATACAGGGT GAGGGTGGGC
TTTGAGAAAA GCGGGGAAAG CCTTGACGGA ATGAGCCTAG TGCTGGACAC GGAGCTAATC
CGCTATAAAT GGCGGGGAGC TGACGGGAAC TTTCCCGAAT ACGAGAAGCT CATACCCGCC
AACTTCAACA CCTTTGTTAG CTTTGATACT AACGAGGCAA TCAGGGCGGT AAGCTCACTC
AAAGTCCTGT CCGATAGCAA GGCATACCCG ATAGACCTCA CAATCGGCAA CGGCAAACTC
ACGATGTCCA GTCCCGATGA TAAGGGAATG GCAGAGATAC CCGCCGATAC ACAGGGCGAT
GGCAAGATAA GACTGGATGG CAGTTACCTT GCTGATGCCT TAAGAGCTTG TGGCGGGATG
GTAGAGCTTA AACTGGTAGA CAGTAAGTCG CCAATGCTCT TTACCTCTCC CGACTATGAG
CTTGTGGTAA TGCCGATGTT TGCGGGTGAA AGCCAGACGC CGAAAGGTGA GGCACAGACC
GCCGAGCCAG TTGAGGTAGA AACCGAACCC GCCGAGGATA CCGAGCCAAC CGAGCCAGAA
GCCGAGATGG TAAGCGAAGC CGAGAAAGCC AATGCGGTAG CTGAAGCCGA AGCAATCACC
AAAGCCGAGA AGCCGAAGCG GAAGCGAAGC AAGGCAAAAG AACCAGTCGC CGTAGCATAA
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| Protein sequence | MNIEGKRSGE GFCAHKTILV NALSRALAER VVLMDFTIGR KGFLTYIKSL GGSNVVKVVP
SSNGDASGLR VADKRLKVVC GANTSYLDDM AWVGEKTPLT LCDVRVSPSN AVKPNLGALE
LSEALSRVVP FTAKEDNRPV LQSVLFKVAD GKLTMVSADG YRLAMVKLDF DGDEGQVLIN
RDELRGVISA LRRAYRVRVG FEKSGESLDG MSLVLDTELI RYKWRGADGN FPEYEKLIPA
NFNTFVSFDT NEAIRAVSSL KVLSDSKAYP IDLTIGNGKL TMSSPDDKGM AEIPADTQGD
GKIRLDGSYL ADALRACGGM VELKLVDSKS PMLFTSPDYE LVVMPMFAGE SQTPKGEAQT
AEPVEVETEP AEDTEPTEPE AEMVSEAEKA NAVAEAEAIT KAEKPKRKRS KAKEPVAVA
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