Gene DehaBAV1_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0146 
Symbol 
ID5132284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp146027 
End bp146677 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content51% 
IMG OID640529049 
Productsugar isomerase (SIS) 
Protein accessionYP_001213615 
Protein GI147668797 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATCA GCAAGCCAAG TAACCCCGGC AGTAAGGAAA ACACGCCCAA AACAACAGAT 
TCCAAGCCTG AAAAAGATAT GGATTGCCTG CTTCGCGGTT ATCTGGGGGG GTTGAGCCAC 
TGTTTGGAGG AGCTGACCGC TCAGGATATA TGCGGGGTAG CCGAGCTGAT TTATCAGGCT 
TATACCCGCC GCCGCCAGAT ATTCATTGTG GGTAACGGGG GAAGTGCTTC TACTGCTTCG 
CATATGGCCC GTGACCTGCG TATAGGCACA TCTCTTCGGG GCAAACCCCG CCTGCGTACC 
TGCAGTTTGG CTGACAATGT GGCTTTCATC ACTTCTCTGG CAAATGATGT CAATTACGAA 
TCTATTTTCA CCGAGCAGCT TATCGGTCAG ATAGAGCCCG GAGATGTTTT GATAGCTATA 
AGCTGTTCGG GCAATTCGGC TAATGTGGTG CGGGCGGCGG AGTACGCCAA TGAATGCGGT 
GCTTCTACGG TGGGGTTAAC CGGTTTCGGT GGGGGGCGGC TTTTAGAGAT TTGTGATATT 
TGTGTAGTCC TTTCCAGCTG TGATTACGGG CAGGTGGAGG ATGTGCATCT GAGTCTTGGG 
CATATATTTT CCTGCATGGT AAAAGCCCGT ATAGAAAAAG AAACTGTCTA G
 
Protein sequence
MIISKPSNPG SKENTPKTTD SKPEKDMDCL LRGYLGGLSH CLEELTAQDI CGVAELIYQA 
YTRRRQIFIV GNGGSASTAS HMARDLRIGT SLRGKPRLRT CSLADNVAFI TSLANDVNYE 
SIFTEQLIGQ IEPGDVLIAI SCSGNSANVV RAAEYANECG ASTVGLTGFG GGRLLEICDI 
CVVLSSCDYG QVEDVHLSLG HIFSCMVKAR IEKETV