| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0124 |
|---|
| Symbol | |
|---|
| ID | 5131486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 122267 |
|---|
| End bp | 122944 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640529027 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001213593 |
|---|
| Protein GI | 147668775 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TATTTATAGA AGACGATAAG AAAATAGTTG AATCTATCTT CTTACTATTC
AAATCCTTTT GGCCGGATAT GGAAACCAAA GCTGTACACT TGGGTAAAAC CGGCATTGAG
ACTGCTTATA AAGAGGACTT TGACATTGCC ATAATAGACC TGGGACTGCC TGATATTGAT
GGCATAAATG TCCTCAAACA AATACGGGCA TTTTCCAGTC TACCCATACT TATTTTAACC
GCCAGAAATA ATGAACAGGA GATTTTTACC GCTTTTGAAT TAGGTGCAGA TGATTATATT
ACCAAACCTT TTCAGCCGCT GGAACTTATA GCCAGAGTAA AATCCCTGTT AAAACGCCTA
AGCAGAGCCA GCCAGGACCT GGGAGTTAAA TACGGGCACT GGAAATTTGG TACCAGCCTG
AAGGAAATAT CTTATAACAA TATTCGCGTA AATTTAACCG TTACAGAAGG CCAGCTGCTG
CACATTTTGT TGACCAAAGC CGGAAGTACT GTCAGTTATG CTGATATATC CAAATCAATT
TGGGGGCGCA ACGAATATTA TGCCAAAGAA ACTATTAAAA CCCACATTAT GAGGATAAGA
CAAAAACTAA GCCGTATTGA TAATTCCAAA GAATTTATCA TAAATATACC CGGAGTTGGC
TACCAGATAG TTGAATAA
|
|---|
| Protein sequence | MKLLFIEDDK KIVESIFLLF KSFWPDMETK AVHLGKTGIE TAYKEDFDIA IIDLGLPDID
GINVLKQIRA FSSLPILILT ARNNEQEIFT AFELGADDYI TKPFQPLELI ARVKSLLKRL
SRASQDLGVK YGHWKFGTSL KEISYNNIRV NLTVTEGQLL HILLTKAGST VSYADISKSI
WGRNEYYAKE TIKTHIMRIR QKLSRIDNSK EFIINIPGVG YQIVE
|
|---|
| |